Fluviispira sanaruensis: JCM31447_30670
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Entry
JCM31447_30670 CDS
T05949
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sbf
Fluviispira sanaruensis
Pathway
sbf03420
Nucleotide excision repair
sbf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JCM31447_30670 (pcrA)
03430 Mismatch repair
JCM31447_30670 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbf03400
]
JCM31447_30670 (pcrA)
Enzymes [BR:
sbf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JCM31447_30670 (pcrA)
DNA repair and recombination proteins [BR:
sbf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JCM31447_30670 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
JCM31447_30670 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_30
PcrA_UvrD_tudor
DUF7258
Motif
Other DBs
NCBI-ProteinID:
BBH54595
UniProt:
A0A4P2VY37
LinkDB
All DBs
Position
3505055..3507406
Genome browser
AA seq
783 aa
AA seq
DB search
MFNEIETPDLSNLNPVQLLASTHKDGPAVVYAGAGSGKTKVICSRIAWLITHEHVPASAI
LAVTFTNKAAKEMKERVEQYIGAKRSKYVIVSTFHAFCARFLRIYAEEAGYNSAFSIYDD
DDQKSLLKDILKKLNISDKILSVNTVKSKIDKIKNQGLTPEEYLHELKHNPELSFQEQRQ
QFRNFGEQYDPEIIQKIYSLYQSTLKKQNAMDFNDLLLVMFKTLENKPHVLESLQNRFRY
FLIDEFQDTNPIQFKLIHLLSSKSQNLFIVGDDDQSIYSWRGAEPSFIINFHHLYKNAKV
FKLEENYRSTKNIIQAATEIIKNNKKRADKTLFTNNEVGTKIKIKSCEDPYIESKFISNE
IYADVQENGKFSDFCILYRTNAQSRSLEDELRRRMMPYIIYGSVRFYERAEIKILLAYIK
LIINPTDEAAFQKIINTPRRGFGDKALSKLKELSTSRNESLLNTITEIVYGGLENEVSRS
IAAVKDFVMCFQKWKSNLDYHNKPSVTLAEVISDINFEEYLRNSYPEDFDERWLNVIELK
NAIIEFENINIEEEIGQQQKQLSGLEKLSRFLEQAMLTVEPTVVNVQQGTANAITLMTIH
SAKGLEFPKVFIAGLEEGVLPHQNSIDSPEAIEEERRLMYVAVTRAKSKLTLTNCKRNRY
KDFIPAQESRFISEISFEITDWVDSAKKTFPREFGKITSTPKFEDKPRIFKGDDLLNKEN
INLKSEMNQDLIWRKGQKVTHKVFGDGVIREIEKSTSGYRLRIKFDKNSVGEKTLIHTYV
TPI
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgaaatagaaactcccgatctttcaaatcttaatccagtgcaattgttagcc
agcacacataaagatggcccagcagttgtttatgcaggggcgggaagtggaaaaaccaag
gttatttgctcaagaattgcttggcttattacccatgaacatgttccggcaagtgcaata
ttagctgttacatttacaaacaaagctgccaaagaaatgaaagaaagagtcgagcaatat
ataggagctaaacgttctaaatatgtcatcgtttctacatttcatgccttctgtgccaga
tttcttcgtatttatgcagaagaagcgggttataattctgctttttcaatatatgatgac
gatgatcaaaagagtttattgaaagatatcttaaaaaaattaaatatctctgataaaatt
ttatccgtaaatacagttaaatctaaaattgataaaataaaaaatcaaggattgacaccc
gaagaataccttcatgaattaaagcacaatcctgagttaagttttcaagaacaaagacaa
cagttcagaaactttggtgaacaatacgatccggagattatccaaaaaatctatagttta
taccaaagcacattgaaaaaacaaaatgcaatggattttaatgatttactgctggttatg
tttaaaaccctagaaaacaaaccccatgtgttagaatcgttgcaaaatagattccgctat
tttctcattgacgagtttcaagataccaaccctattcaatttaaacttatccatttatta
agctctaaaagtcaaaatttgtttattgttggagatgatgatcaaagtatttattcatgg
cgcggcgctgaaccttcttttataataaactttcatcatttatataagaatgcaaaagta
tttaaacttgaagagaactatagaagtactaaaaatattattcaagcagccaccgaaatt
attaagaataataaaaaacgcgctgacaagacacttttcactaacaacgaagttggcaca
aaaattaaaattaaatcctgcgaagatccttatatagaatctaaatttatttctaatgaa
atatatgcggatgttcaagaaaatggtaaattttctgatttctgcattttatatcgcaca
aatgcacaaagccgttcacttgaagatgagttaagaagacgaatgatgccatatatcata
tatggatcagttcgtttttatgagagagctgaaataaaaatattacttgcttatattaaa
ttaattataaacccaactgacgaagctgcatttcaaaaaataattaacactccccgtaga
ggttttggtgacaaggcactctcaaaattaaaagaattatctacttctcgcaatgaaagt
ttactaaatacgattactgaaattgtctatggcggattagaaaatgaagtatctcgatca
attgcagcagtaaaagatttcgtaatgtgctttcaaaaatggaagagcaatctagattat
cacaacaaaccatcagttactttagctgaggtaatatcagatatcaatttcgaagaatat
ttaagaaattcatatcctgaagatttcgacgaaagatggttgaacgtaattgaattaaaa
aatgcgattatagaatttgaaaatataaatattgaagaagaaataggacaacaacaaaaa
caactctccgggttagaaaagctctctcgctttttagaacaagctatgctcaccgttgag
ccaaccgtggtcaatgttcaacaaggtactgcaaacgcaatcactttgatgacaatccac
tctgcaaaggggcttgagtttccaaaagtttttattgcgggccttgaagaaggcgttctt
ccacatcaaaactcgatcgattctccagaagctatcgaagaggaacgaagacttatgtat
gttgctgttacccgcgcaaaaagcaaattaactctgacaaattgcaaacgtaatagatat
aaagattttattccagctcaggaaagtcgttttatttctgaaatttcttttgaaataacc
gattgggttgactctgctaaaaaaacatttccaagagaatttggtaaaataacttctacc
cctaaatttgaagacaaaccaagaatttttaagggtgatgatcttttaaataaagaaaat
ataaatttaaaaagtgaaatgaatcaagatttaatttggagaaaaggacaaaaagttaca
cataaagtatttggcgatggtgttataagagaaattgaaaaaagcacctcaggatataga
ctcagaattaaatttgataaaaattctgttggagaaaagactcttatacatacatacgtc
acgcccatttaa
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