Fluviispira sanaruensis: JCM31447_312100
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Entry
JCM31447_312100 CDS
T05949
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
sbf
Fluviispira sanaruensis
Pathway
sbf02020
Two-component system
sbf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sbf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JCM31447_312100
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JCM31447_312100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbf03021
]
JCM31447_312100
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sbf02035
]
JCM31447_312100
Transcription machinery [BR:
sbf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JCM31447_312100
Bacterial motility proteins [BR:
sbf02035
]
Flagellar system
Flagellar assembly proteins
Stator
JCM31447_312100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
PhyR_sigma-like
GerE
Motif
Other DBs
NCBI-ProteinID:
BBH51931
UniProt:
A0A4P2VH08
LinkDB
All DBs
Position
420389..421210
Genome browser
AA seq
273 aa
AA seq
DB search
MSTSGATQKKQIFVDDNAEQPKPKKVAQNQTRAVPLTSDPMRNQIIMDYAPLIKYIAQKI
AARLPSNIDLDDLFSAGVIGLMDAIDKYDPSRDNKFKTYAEFRVRGAMLDELRNQDWVPR
SVRESNKKEDKAKLELEHKLGRPATEREIAQFLEVPLEEYQERMGRTRVSMMSLEELGGT
HSSDKKSLLDCLENPNSKNPFIQLKNKGVRDIIMKTVEELPEKQKLVLSLYYYEDLNLKE
IGRILDVTESRVSQLHTQAVQKMKLKLRHLLQE
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatcgggagccacacaaaaaaaacaaatttttgttgatgataatgctgaacaa
ccaaaaccaaaaaaagttgcacaaaatcaaacaagagctgttcctttaacgagtgatcct
atgagaaatcaaatcattatggattatgcccctcttataaaatatattgctcaaaagatt
gcagcgcggttgccatctaacattgatttagacgatcttttttcagcaggtgtcattgga
ttaatggatgcgattgataaatatgaccctagtcgagataataagtttaaaacctatgca
gaatttcgtgtgcgtggagctatgttggatgaattgagaaatcaggattgggtacctaga
agtgtgcgagaaagtaacaaaaaagaagataaagctaaacttgaacttgaacataaactt
ggtcgtcctgcaactgagagagaaattgctcagtttcttgaggttcctttagaggaatat
caagagcgtatgggaaggacgcgcgtttcaatgatgagccttgaagaattgggtgggaca
cattctagtgacaaaaaatcgttacttgattgccttgaaaatccaaattcaaaaaatcct
tttattcaactaaagaataagggagttcgtgatattattatgaaaacagtggaagaattg
ccagaaaaacaaaaattagttttaagtctttattactatgaagacttaaatttaaaagaa
attggccgaatattagatgtaacagaatctcgtgtatctcagttgcatactcaggctgtt
caaaaaatgaagttaaagctgagacacctcttgcaggagtaa
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