Fluviispira sanaruensis: JCM31447_312400
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Entry
JCM31447_312400 CDS
T05949
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sbf
Fluviispira sanaruensis
Pathway
sbf03030
DNA replication
sbf03430
Mismatch repair
sbf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JCM31447_312400
03430 Mismatch repair
JCM31447_312400
03440 Homologous recombination
JCM31447_312400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbf03032
]
JCM31447_312400
03400 DNA repair and recombination proteins [BR:
sbf03400
]
JCM31447_312400
Enzymes [BR:
sbf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JCM31447_312400
DNA replication proteins [BR:
sbf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JCM31447_312400
DNA repair and recombination proteins [BR:
sbf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JCM31447_312400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
AAA_22
RCF1-5-like_lid
AAA_30
RuvB_N
TIP49
AAA_19
AAA_assoc_2
AAA_5
AAA_16
TsaE
PIF1
AAA_14
AAA_24
Herpes_HEPA
FCH
AAA_18
AAA_28
Motif
Other DBs
NCBI-ProteinID:
BBH51959
UniProt:
A0A4P2VKW1
LinkDB
All DBs
Position
complement(448450..450351)
Genome browser
AA seq
633 aa
AA seq
DB search
MRLDNNSQNHITPLHEDKNYIVLARRTRPQSFSELVGQEDVSKAIEGMLSNKKVPHAFLF
TGTRGTGKTSSARILAKSLCCEKGPTHSPCQTCVHCTQITACAHDDVLEIDGASNTGIDN
IRELREATRFYPNSARYKVFIIDEVHMLSTGAFNALLKTLEEPPPQVVFILATTELHKVP
ITVRSRCMIFSFKKIDPAVITEHLKGILHKENIQFEDDALKMIAREAKGSLRDSLSLLEQ
IIAICDHTFISTEQTKKGLCLQGEEIAERIFSAICTQDIGQALELLQQADTASLDIATLI
ENTAQLFRNSMLIKSLNDKERTIRLTQLLPKEYDSLKMTADKLSIASLSEIFRLLSSSVK
EIARSNAGLAWAEIIITDCIARAEWLSAAEIMSLMRSGGGQSAPPLRSAAQKTNTASQEK
TLTKEELRVTAPPLQNPGNVKANSIDLDAFKNLVMHAEKRSKTLATRLGFAKIDIFTAKT
VQFSDSPENSTYLSFNESDLIHFWESIREIGFQDAEFKGSFTPKAPQTRKISIKEQRPLH
DNSKNPSDRQTHSLKTPKNQQSVAQHFQKYNENISINAKTESKQPTKKAISLSEIKTHEK
SQDFQQRERAILEKEHIQQLKKLATEIQITSLD
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttagacaacaactcccaaaaccatattacccctctccatgaggataaaaattat
attgttttggcacgacgcacacgcccacaaagtttttcagagcttgtgggccaagaagat
gtctccaaagccatcgaaggaatgctttccaataaaaaagttccccacgcttttcttttt
acaggcacaagaggaacaggaaaaacctccagtgcacgtatcctggcaaaatctctctgc
tgcgaaaaaggtccgacccattccccttgtcaaacttgcgtccattgcacacaaatcact
gcgtgcgcccacgatgacgtccttgaaatcgacggagcttcaaacacaggcattgacaat
atcagggaattacgggaagcaactcgtttttatccaaattcggctcgttataaagttttt
atcattgacgaagtgcatatgctcagcacgggtgcattcaacgccttattgaaaaccctt
gaagagccacctccgcaagttgtatttatcttagccacgacagagctgcacaaagttcct
atcaccgtgcgctctcgctgcatgatcttttcctttaaaaaaatagaccctgcggtgatc
acggaacatttaaaaggtattttgcacaaagaaaatattcaatttgaagacgatgccctg
aaaatgattgcgcgcgaagcaaaaggctctctaagagattctctcagtcttctcgaacag
atcattgcaatttgtgatcacacatttatttcaactgaacaaacaaaaaaaggactttgc
ttacagggagaagaaatagctgaaagaatattctctgctatttgcactcaagacataggc
caagcacttgaactcttgcagcaagcagataccgcaagccttgatatcgcaactctgata
gaaaacacagcacagctcttccgcaatagtatgcttatcaagagcctaaatgataaagaa
agaaccattcgtctcactcagctcttaccaaaagaatatgattctttaaaaatgaccgca
gacaagctatccatagcaagtttaagtgaaatatttagactgctttcaagttctgtaaaa
gaaattgctcgaagcaatgcaggccttgcgtgggctgaaattataatcacagattgtatt
gcccgagcagaatggctctcagcggcggaaatcatgtcactcatgcgcagtggaggagga
cagagtgctcctccactgcgcagtgcagcacaaaaaaccaatacagcaagtcaggaaaag
acactgacaaaagaagaactaagagtaacagcacctcctctacaaaatcctggcaatgta
aaagcaaattctattgatttagacgcatttaaaaatctcgtaatgcatgccgaaaaaaga
agcaaaacattagctacacggttgggatttgcaaaaatcgatatttttactgccaaaaca
gtccaattttcagattcgccagaaaactcaacctatctttcctttaatgaatctgattta
attcacttttgggaaagcatacgggaaattggttttcaagatgctgaatttaaaggatca
tttacacctaaggctccgcaaacaagaaaaatatcaatcaaagaacagcgacccctgcat
gataattcaaaaaatccatcagacagacaaactcattcactcaagacccccaaaaaccaa
caaagcgttgctcaacattttcaaaaatataatgaaaatataagtataaatgcaaaaaca
gaaagtaaacaaccaacaaagaaggctatatctctctcagaaattaaaacccatgaaaaa
agccaagattttcaacaaagagagagagctattcttgaaaaagaacatattcaacaactt
aaaaaactcgcaacggagattcaaatcacttcactcgattaa
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