Salmonella bongori NCTC 12419: SBG_0084
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Entry
SBG_0084 CDS
T01579
Symbol
hepA
Name
(GenBank) putative ATP-dependent helicase HepA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
sbg
Salmonella bongori NCTC 12419
Brite
KEGG Orthology (KO) [BR:
sbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbg03021
]
SBG_0084 (hepA)
Transcription machinery [BR:
sbg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
SBG_0084 (hepA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
CCC29181
UniProt:
A0A0K0H762
LinkDB
All DBs
Position
complement(91977..94883)
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAIDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT
ITSHEGWLLHVDEVKEENGLLTYVGTRLDTEEPNVMLREVLLDSKLVFSKPQDRLFAGQI
DRMDRFALRYRARKFQSEQYRMPYSGLRGQRTSLIPHQLNIAHEVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH
DAYNPFETEQLVICSLDFARRNKQRLEHLCDAEWDLLVVDEAHHLVWSVDAPSREYMAIE
QLAERVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL
AGNKLSNDELNKLGDLIGEQDIEPLLQAANSDRDDAQAARQELVSMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTVKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPEQIYQEFEGD
TGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKATTALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRAIYDSVYHSLINYLAAPEET
EGFDDLINSCREQHEALKAQLEQGRDRLLEIHSNGGEKAQQLTQSIEEQDDDTSLIAFAM
NLFDIVGINQDDRGDNLIVLTPSDHMLVPDFPGLPEDGCTITFERDIALSREDVQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTP
VRMLLDKNGNNLATQVEFETFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGETQIEQSAR
ALIDNARREADEKLSGELSRLEALRAVNPNIRDDELAAIDSNRQQVLESLDQAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgaactgggacttgga
accgttgttgcgatagatgcacgaaccgtcactctactttttccgtccacaggggaaaac
cgtctgtatgcgcgcagtgattctcccgtgacccgcgtcatgttcaatcctggcgacacg
attacaagccatgaaggttggctgttacatgtcgatgaagtaaaagaagaaaatggtctg
cttacctatgtcggcacccgactggataccgaagagcccaatgtgatgctgcgtgaagtt
ctgctcgacagtaaattggttttcagtaagccccaggatcgtcttttcgctggtcaaatc
gatcgtatggaccggttcgcactgcgctatcgcgcccgtaaatttcagagcgagcagtac
cgtatgccgtacagcggcctgcgcggacagcgtaccagcctgattccgcatcagcttaac
atcgctcatgaggttggccgtcgtcacgcgccgcgcgtgctgctggcggacgaagtgggc
ctcggtaaaacaattgaagccgggatgatcctgcatcaacagttgttatccggcgccgca
gaacgcgtattgatcattgttccggaaacgctacaacaccagtggctggtagaaatgctg
cgccgtttcaacctacgctttgcgctgttcgacgacgaacgctacgccgaagcgcagcac
gatgcctataacccgtttgaaaccgagcaactggtgatctgctcgctggactttgctcgc
cgtaataagcagcgtctggaacatttgtgtgacgccgagtgggatttactggtggtcgac
gaagcgcaccatctggtatggagcgtcgatgcgccaagccgggaatatatggccatcgaa
caattagccgagcgtgtgccgggtgtactactgctgaccgccacgccggaacaactgggg
atggaaagtcactttgctcgcctgcgtctgctcgatccgaaccgtttccatgatttcgcg
cagttcgtggaagaacaaaaaaactaccgccctgttgctgatgcagtggcaatgctgctg
gcaggtaataaactcagcaacgacgaactgaacaagctgggcgatctgatcggcgaacaa
gatatcgagccattactacaggccgccaatagcgatcgcgatgacgcgcaggccgctcga
caggagctggtgtccatgttgatggatcgccacggcaccagccgcgtgctgtttcgcaac
acccgtaacggcgtgaagggtttcccgaaacgcgaactgcatacggtgaagctgccgcta
ccgacccagtatcagaccgccattaaggtctccggtattatgggcgcacgtaaaagcgcg
gaagatcgcgcccgcgatatgctctatccggaacagatttatcaggaatttgaaggcgat
accggtacatggtggaacttcgatccacgtgttgagtggctgatgggttacctgaccagc
caccgttcgcagaaggtactggtgatctgcgccaaggcgaccaccgccttacagctggaa
caggtgctgcgcgagcgtgaagggatccgcgccgccgtgttccatgaaggcatgtcgatt
atcgaacgcgaccgcgccgccgcctggttcgccgaagaagatactggcgctcaggtgctg
ttatgttccgaaatcggctccgaaggacgcaacttccagttcgccagcaatctggtgatg
tttgatctgccgtttaacccggatctactggaacagcgtattggtcgtctggatcgtatc
ggtcaggcgcatgatatccagatccatgtcccgtacctggaaaaaaccgcccagtcggtg
ctggttcgctggtatcatgaaggactggacgcctttgaacacacctgcccaaccggccgc
gccatttatgattcggtctaccacagcctgattaattatctggccgcgcctgaagaaacc
gaagggtttgacgatctgattaactcctgccgcgaacagcatgaagcgctaaaagcccag
ttagaacagggccgcgaccgcctgctggagatccactcaaacggcggcgaaaaagcgcaa
cagctgacgcaaagtattgaagaacaggatgatgataccagtctgatcgcgttcgccatg
aacctgttcgatattgtcggcattaaccaggacgatcgcggcgacaatctgattgtactg
acgccgtccgatcacatgctggtgccggatttcccgggcctgccggaagatggctgcacg
attacgtttgaacgtgacatcgcgctgtctcgcgaagatgtgcagttcattacctgggaa
catccgttgatccgtaacggactggatctgatcctgtccggcgacaccggcagcagcacc
atttcgctgttaaaaaataaagcgctgccggtaggtacgctactggtcgaactgatttat
gtcgttgaagcgcaggcaccgaaacaactgcaactgaaccgcttcctgccaccgacgccg
gttcgtatgctgttagataaaaacggcaacaatctggccactcaggttgagtttgaaacc
tttaaccgtcagttaagcgccgttaatcgccacaccggcagcaaactggtcaacgccgtt
caacaggacgtccacgccattttgcaactgggcgagacccagattgaacagtccgccagg
gcactgattgataacgctcgtcgcgaggctgatgaaaaactgtccggggaattgtcacgt
ctggaagcgctgcgcgccgtcaacccaaacattcgtgatgatgaacttgccgctatcgac
agtaaccgtcagcaggtactggaaagcctggatcaggcgggctggcgtctggacgctttg
cgtcttatcgtcgtcacgcaccaataa
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