Salmonella bongori NCTC 12419: SBG_0181
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Entry
SBG_0181 CDS
T01579
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sbg
Salmonella bongori NCTC 12419
Pathway
sbg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SBG_0181 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbg03019
]
SBG_0181 (pcnB)
Enzymes [BR:
sbg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SBG_0181 (pcnB)
Messenger RNA biogenesis [BR:
sbg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SBG_0181 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
CCC29277
UniProt:
A0A0K0H7G4
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All DBs
Position
complement(201421..202839)
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AA seq
472 aa
AA seq
DB search
MTLPRCTIFTRVANFCRKVLSREESEAEQAVARPHMTIIPREQHAISRKDISENALKVMY
RLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPDQVRKLFRNCRLVGRRFRLAHVMF
GPEIIEVATFRGHHEGSESDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVA
DFTVRDYVGGMQDLKEGVIRLIGNPETRYREDPVRMLRAVRFAAKLNMRISPETAEPIPR
LATLLNDIPPARLFEESLKLLQAGYGYETYKKLREYNLFQPLFPTITRYFTENGDSAMER
IIAQVLKNTDTRIHNEMRVNPAFLFAAMFWYPLLEMAQKIAQESGLAYYDAFALAMNEVL
DEACRSLAIPKRLTTLTRDIWQLQLRMSRRQGKRAWKLMEHPKFRAAFDLLELRAQVENN
AELQRLAKWWSEFQVSAPPEQKGMLNELDDDPAPRRRRPRPRRRAPRREGAA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgacactaccgaggtgcactatttttacccgagtcgctaatttttgccgtaaggtgtta
agccgcgaggagagcgaggcagaacaagccgtcgcccgtccacatatgacgatcatcccg
cgtgaacagcacgctatttcccgcaaagatatcagtgaaaatgccctgaaggtaatgtac
aggcttaataaagcgggatacgaagcctggctggtcggcggcggcgtccgcgaccttcta
ctcggcaaaaagccgaaggatttcgacgtgactaccaacgctacgccggatcaggtacgg
aaattgttccgaaattgccgtctggtaggtcgccgttttcgtcttgctcacgttatgttt
ggcccggaaattatcgaagtggccacgtttcgtggtcatcatgaaggcagcgaaagcgac
cgtaccacctcccagcgtggacaaaacggtatgctactgcgcgataatatcttcggttct
atcgaagaagatgcacagcgccgcgacttcaccattaacagcctttattacagcgtggcg
gattttaccgtacgcgattacgtcggcgggatgcaggatctgaaagagggcgtaattcgt
ctgatcggcaatccggaaacacgttatcgcgaagatccggttagaatgctgcgcgccgtg
cgtttcgccgccaagcttaatatgcgcatcagccctgaaacggcagagccgatcccgcgt
ctggcgacactgctgaacgatatccctccggcacgcctgtttgaagagtcgctcaaactc
ctccaggctggctatggctacgaaacctataaaaagctgcgtgaatacaacctgttccag
ccgctgtttccgaccattacgcgttacttcaccgaaaatggcgatagcgcgatggaacgc
attattgcgcaggtattgaaaaacaccgatacccgtattcacaacgagatgcgcgttaac
ccggcattcctgtttgccgctatgttctggtatccgctgctggaaatggcgcagaaaatc
gctcaggaaagcggccttgcctattacgatgctttcgctctggcgatgaatgaagtatta
gacgaagcttgccgttcgctggcgatacccaaacggctgactacactgacccgtgatatc
tggcagctacagctacgaatgtcccgtcgccagggcaaacgcgcctggaagctgatggaa
catcctaagtttcgcgccgcgtttgatttgctggagttgcgcgcccaggtggaaaacaat
gctgaactgcaacgcctggcgaaatggtggagcgaatttcaggtttccgcgccgccagaa
caaaaaggaatgctcaacgagctggacgacgaccctgctccacgccgtcgtcgtccgcgt
ccacgccggagagcaccgcgtcgtgagggcgctgcatga
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