Salmonella bongori NCTC 12419: SBG_0602
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Entry
SBG_0602 CDS
T01579
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sbg
Salmonella bongori NCTC 12419
Brite
KEGG Orthology (KO) [BR:
sbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbg03400
]
SBG_0602 (phrB)
Enzymes [BR:
sbg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SBG_0602 (phrB)
DNA repair and recombination proteins [BR:
sbg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SBG_0602 (phrB)
Prokaryotic type
SBG_0602 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CCC29694
UniProt:
A0A0K0H8M6
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All DBs
Position
678709..680130
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AA seq
473 aa
AA seq
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MPTHLVWFRRDLRLQDNLALAAACRDASARVLALYISTPAQWQAHDMAPRQAAFISAQLN
ALQTALAEKGIPLLFHEVADFNASIETVKNVCRQHDVSHLFYNYQYEINERQRDAAVEKA
LPSVICEGFDDSVILAPGAVMTGNHEMYKVFTPFKNAWLKRLKEDIPPCVPAPTIRASGA
RATPLTPVSLNYPQQAFDATLFPVEENAVIAQLRQFCAQGADEYASRRDFPAVEGTSRLS
ASLATGGLSPRQCLHRLLAEQPQALDGGPGSVWLNELIWREFYRHLITWYPALCKHQPFI
RWTKRVAWQENSHYFQAWQKGETGYPIVDAAMRQLNATGWMHNRLRMITASFLVKDLLID
WRLGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDRDGEFIRQW
LPALRDLPGKAIHEPWRWAEKAGVVLDYPRPIVDHKQARVATLSAYETARKGA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcctacccatttagtctggttcaggcgcgatctgcgtttacaggataaccttgcgctg
gccgccgcctgccgcgatgcatccgcgcgggtgctggcgctttatatttccacccccgcg
cagtggcaggcccatgatatggcgccgcggcaggcggcattcatcagcgcgcagctcaat
gcgctacagacggcccttgcagagaaagggattccgctgctgtttcatgaagtggcggat
tttaacgccagtattgagacggttaaaaacgtttgccggcagcatgacgtcagccatctg
ttttataactatcagtatgagattaacgaacgtcagcgtgatgcagcggtggaaaaagca
ctgccatctgtcatctgcgaaggctttgacgatagcgtgattctggcgcccggcgcggtg
atgaccggcaatcatgaaatgtataaagtttttacaccgtttaaaaacgcctggttgaaa
cggctaaaagaggatatcccgccgtgcgttccggccccgacgatccgggcgagcggcgcg
cgcgctacccccttaacgccagtctcgcttaactacccgcaacaggcgtttgacgccacg
cttttcccggttgaagaaaacgcggtcatcgcgcagctacgtcagttttgcgcgcagggc
gcagacgagtatgcctcacggcgcgatttccctgcggttgaaggcaccagtcggctttcc
gccagcctggcgacgggggggctgtcgccgcgacagtgcctgcaccgactactggcggag
cagccgcaggcgctggacggcggaccgggaagcgtctggttgaatgagctcatctggcgg
gaattttaccgtcatttaataacctggtatccggcattatgcaaacaccagccgtttatc
cgctggacaaaacgcgtcgcgtggcaggagaactcacactattttcaggcatggcagaaa
ggcgaaaccggttatcccattgtcgatgcggcgatgcgccagcttaacgcgacgggctgg
atgcataaccgtttacgcatgattaccgccagctttctggtaaaagatctgctgattgac
tggcggttgggggagcgctatttcatgtcgcagcttattgacggcgatcttgccgccaat
aatggcggctggcagtgggccgcttcaaccggtactgatgccgcgccttattttcgtatt
tttaatcccacgacgcagggggagaggtttgatcgcgacggcgaatttatccgccagtgg
ctgccagcgttacgtgatctccccggaaaagcgattcacgagccgtggcggtgggcggaa
aaagcgggagttgtgcttgattatccacggcccattgtggatcacaaacaggcgagagtc
gcgacgctttccgcctatgagactgcgagaaaaggggcgtaa
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