Salmonella bongori NCTC 12419: SBG_0705
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Entry
SBG_0705 CDS
T01579
Symbol
rhlE
Name
(GenBank) putative ATP-dependent RNA helicase rhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
sbg
Salmonella bongori NCTC 12419
Pathway
sbg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SBG_0705 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbg03019
]
SBG_0705 (rhlE)
Enzymes [BR:
sbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SBG_0705 (rhlE)
Messenger RNA biogenesis [BR:
sbg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SBG_0705 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
CCC29797
UniProt:
A0A0K0H8S3
LinkDB
All DBs
Position
795816..797171
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AA seq
451 aa
AA seq
DB search
MSFDSLGLHPDILRAIAGQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFSLPLL
QHLITQQPHAKGRRPVRALILTPTRELAAQIGENIRDYSQYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLAKLPPK
RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGHGQGGAGRGQQPRRQDGGAP
KAKAKPRTGEGKSAGDKARPPRRPRRITPAQ
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattccctgggtttacatcctgatattttgcgcgccatcgccgggcagggt
taccgtgaaccgacccccattcagcagcaggcgattcccgccgtactggaaggccgcgac
ctgatggccagcgcgcagaccggcaccggtaaaaccgctggtttttcactgccgttatta
cagcatctgattactcaacaaccacatgcgaagggacgtcgtccggtgcgggcgctgatc
ctcactccgactcgcgaactggcggcgcagattggcgaaaacatccgcgattacagtcag
tatctcaacattcgctcgctggtcgttttcggcggcgtgagcatcaatccgcagatgatg
aaactgcgtggtggggtcgatgtgctggtggcaacgccggggcgcctgctcgatctggaa
catcagaatgctgtgaagctggatcaggtagaaattctggtgctggacgaggccgaccgg
atgctggatatgggctttatccacgatattcgccgcgtgctggcaaaactgccgccgaag
cgtcagaacctgctattttctgcgaccttctctgacgatattaaagcgcttgccgaaaag
ctgctgcataacccgctggaaattgaagtggcgcgccgtaataccgcctctgagcaggtc
acacagcatgtccattttgtcgataaaaaacgcaaacgcgaactgctgtcacaaatgata
ggtcagggtaactggcaacaggtgctggtcttcacccgcaccaagcatggcgcgaaccat
ctggcggaacagctaaataaagacggtattcgcagcgcggcgatccacggtaataaatcg
cagggcgcacgtactcgcgcattggccgattttaaatccggcgatattcgcgtgctggtg
gcgaccgacattgctgcgcgtggcctcgatatcgaagagttgccgcacgtggtcaactat
gagttgccaaatgtgccggaagattacgtacaccggattggccgtaccggtcgcgcggcg
gcaaccggcgaagcgctgtcgctggtctgtgttgacgagcacaagctgttacgtgatatt
gaaaagctgctgaaaaaagagatcccacgtatcgctattccgggttatgaacccgatccg
tcaatcaaagcggagccaattcagaacggtcgccagcagcgtggcggcggtggtcgcggc
cacgggcagggcggcgcaggccgtggccagcagccgcgtcgtcaggacggcggcgcgccg
aaggcgaaagccaaaccgcgtactggcgaggggaaatctgctggcgacaaagcccgtccg
ccgcgccgtccgcgtagaattacccccgcacaataa
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