Salmonella bongori NCTC 12419: SBG_1577
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Entry
SBG_1577 CDS
T01579
Symbol
topA
Name
(GenBank) DNA topoisomerase I, omega protein I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sbg
Salmonella bongori NCTC 12419
Brite
KEGG Orthology (KO) [BR:
sbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbg03032
]
SBG_1577 (topA)
03400 DNA repair and recombination proteins [BR:
sbg03400
]
SBG_1577 (topA)
Enzymes [BR:
sbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SBG_1577 (topA)
DNA replication proteins [BR:
sbg03032
]
Prokaryotic type
DNA Topoisomerases
SBG_1577 (topA)
DNA repair and recombination proteins [BR:
sbg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SBG_1577 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
MetOD1
Motif
Other DBs
NCBI-ProteinID:
CCC30655
UniProt:
A0A0K0HAM4
LinkDB
All DBs
Position
complement(1724638..1727235)
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSAAKKSADSTSTKTAKKPK
KDERGALVNRMGVDPWHNWDAHYEVLPGKEKVVSELKQLAEKADHIYLATDLDREGEAIA
WHLREVIGGDDARYSRVVFNEITKNAIRQAFDKPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWEIDANTTTPSGDALPLQVTH
QNDKPFRPVSREQTLAAISLLEKARYSVLEREDKPTSSKPGAPFITSTLQQAASTRLGFG
VKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYISDNFGKKYLPDNPNQYASKEN
SQEAHEAIRPSDVSVMAESLKDMEADAQKLYQLIWRQFVACQMTSAQYDSTTLTVGAGEF
RLKARGRILRFDGWTKVMPALRKSDEDRTLPAVNKGDALTLLELTPAQHFTKPPARFSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMNY
DFTAQMEDSLDQVANHQAEWKAVLDNFFSDFTQQLDKAEKDPEEGGMRPNQMVLTSIDCP
TCGRKMGIRTASTGVFLGCSGYALSPKERCKTTINLVPENEVLNVLEGDDAETNALRAKR
RCQKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHL
KMGRFGKYMACTNDECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGIF
LAANTFPKSRETRAPLVEELYRFRDRLPEKLRYLADAPQQDPEGNKTVIRFSRKTKQQYV
AAEKEGKATGWSAFFVDGKWVEGKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctcttgtcatcgttgagtccccggcaaaagccaaaacgatcaacaagtat
ctgggtaatgactacgtggtgaaatccagcgtcggtcatatccgtgatttgccgaccagt
ggctcagcagctaaaaagagcgccgactctacctccaccaaaacggctaaaaagcccaaa
aaggatgaacgtggcgctctcgtcaaccgtatgggggttgacccgtggcacaactgggat
gcgcactatgaagtgctccccggtaaagagaaggtcgtctctgaactgaaacagttggcg
gaaaaagccgaccatatctatctcgcaaccgaccttgaccgcgaaggggaagccattgca
tggcatctgcgggaagtgattggcggcgatgacgcgcgctacagccgcgtagtctttaat
gaaattactaaaaatgcgattcgccaggcgtttgacaagcccggcgagttaaatattgat
cgcgtcaatgcgcagcaggctcgtcggtttatggatcgcgtggtgggctatatggtctcg
ccgttgctgtggaaaaagatcgcccgtggcctgtcggcaggtcgcgtacagtctgtcgcg
gtccgtctggtcgtcgagcgcgaacgtgaaattaaagcgtttgttccggaagagttctgg
gaaatcgacgccaatacgactacgccttctggcgatgcgttacctctgcaagtgacacat
cagaacgacaagccgttccgaccagtgagccgcgagcagacgcttgccgccattagtctg
ctggaaaaagcgcgctatagcgtactggagcgtgaagataaaccgaccagcagcaaaccg
ggggcaccgtttatcacctccacgctacaacaggcggccagcacccggttgggttttggc
gtgaagaaaaccatgatgatggcgcagcgcttgtatgaagcgggttacatcacctacatg
cgtactgactccacaaatctgagtcaggatgcggttaacatggtgcgtggctacatcagc
gataatttcggcaagaaatacctgcctgataatccgaatcagtacgccagtaaagagaat
tcacaggaggcgcacgaagcgatccgtccttctgatgtgtctgttatggcggaatcgctg
aaagacatggaggctgatgcgcagaagctgtatcagctgatttggcggcagtttgttgcc
tgccagatgacatctgcccaatacgactccacgacgcttaccgttggggcgggcgagttc
cgcctgaaagcgcgtggccgtattctgcgttttgacggctggacaaaagtgatgccagcg
ctgcgtaagagcgatgaagatcgcaccttgccggctgtgaataaaggcgatgcgctgacg
ctacttgaactgacgcccgcgcagcactttaccaaaccgccagcccgttttagcgaagcg
tcgttggttaaagaacttgaaaagcgtggtattggccgtccgtctacctatgcgtcgatc
atttctaccattcaggatcgcggctatgttcgcgttgagaatcgtcgcttctatgcggaa
aaaatgggtgaaatcgttaccgatcggctggaagaaaatttccgcgaattgatgaactac
gattttaccgcgcagatggaagatagcctggatcaggttgcgaatcatcaggccgagtgg
aaagcggtactggataacttcttcagcgattttactcagcagcttgataaagccgagaaa
gatccggaagaaggagggatgcgccctaaccagatggtgttgaccagtatcgactgccct
acctgtggccgtaaaatggggattcgtaccgccagtacgggggtttttctcggttgttca
ggttatgcgctttcgccaaaagagcgttgtaaaaccacgattaacctggtgccggaaaat
gaagtcctgaacgtactggagggcgacgacgctgaaaccaacgcgctacgtgcgaagcgt
cgttgtcagaagtgtggtacggcgatggatagctatctgattgatccaaagcgtaagttg
catgtctgcggtaataacccaacctgtgacggctacgagattgaagaaggcgagttccgc
atcaaagggtatgatggcccgatcgttgagtgtgagaaatgtggttccgaaatgcatctg
aaaatggggcgttttggtaagtacatggcctgtactaacgacgagtgtaagaatacccgt
aagatcctgcgtaacggcgaagttgcgccgccgaaagaagatcccgttccactgccggaa
ctgccgtgtgaaaaatcggacgcatactttgtgttgcgcgacggcgccgccggaatattc
ctggcagccaacacctttccgaaatctcgcgaaacgcgtgcgccgttagttgaggagctc
taccggttccgcgatcgcctgccggagaaattacgttacctggcggatgcaccgcaacag
gatccggaagggaataaaacggttattcgcttcagccgtaaaactaagcaacagtatgtc
gcggcggaaaaagaggggaaagcgacgggatggtcagcgttcttcgttgacggtaagtgg
gttgaaggcaaaaaataa
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