Salmonella bongori NCTC 12419: SBG_1886
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Entry
SBG_1886 CDS
T01579
Symbol
dacD
Name
(GenBank) penicillin-binding protein
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
sbg
Salmonella bongori NCTC 12419
Pathway
sbg00550
Peptidoglycan biosynthesis
sbg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sbg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SBG_1886 (dacD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbg01002
]
SBG_1886 (dacD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbg01011
]
SBG_1886 (dacD)
Enzymes [BR:
sbg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SBG_1886 (dacD)
Peptidases and inhibitors [BR:
sbg01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
SBG_1886 (dacD)
Peptidoglycan biosynthesis and degradation proteins [BR:
sbg01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
SBG_1886 (dacD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
CDPS
Motif
Other DBs
NCBI-ProteinID:
CCC30951
UniProt:
A0A0K0HC53
LinkDB
All DBs
Position
complement(2044721..2045893)
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AA seq
390 aa
AA seq
DB search
MLLKRRLFIAASLFAMHLSPALAADTVSFAPQPPAIDAGAWVLMDYTTGQVLTAGNEHQQ
RNPASLTKLMTGYVVDRAIDSHRISPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDHVSV
RDLSRGLIVDSGNDACVALADYIAGGQPQFVAMMNSYVKKLNLQDTHFETVHGLDAPGQH
SSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMHIDGLKTGHTSG
AGFNLIASAVDGQRRLIAVVMGAKSSKGREEQARKLLQWGQQNFATVQILHRGKKVGSER
IWYGDKENIALGTEQDFWMALPKTEIPNIKAKYVLDKKDLEAPIAAHQRVGEIELYDRDK
LIAQWPLVTLEAIGKGSMFSRLSDYFHHKA
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgctgttgaaacgccgtttgtttattgccgcttctttattcgcaatgcacctttctcct
gcgcttgcggctgataccgtaagttttgctccccaaccgccagccattgatgcaggcgcc
tgggtgttgatggattatactacgggacaggttcttaccgccggtaatgaacaccagcaa
cgcaatcccgccagcctgacaaaactcatgacgggttacgtcgtcgatcgcgctatcgat
agccatcgtatcagtcctgacgatatcgtcaccgtcgggcgtgacgcctgggcaaaggat
aatccggtttttgtcggctcctcgctgatgtttttaaaagaaggcgaccacgtgtcggtg
cgcgacttaagccgtggcttaattgtggattccggtaacgatgcttgtgtagcgctggcg
gattatatcgcgggcgggcagccgcagtttgtggcgatgatgaacagctatgtgaaaaaa
cttaatttacaggatacccattttgaaactgtccacgggttggatgcgccgggacaacat
agttctgcatatgatctggccgtactctcccgggcgatcattcacggcgaacctgagttt
tatcacatgtacagcgagaaaagcctgacctggaacggcatcacgcagcagaaccgtaac
ggtttactgtgggataagacaatgcatattgatgggcttaaaaccgggcatacgtccggg
gcgggattcaacctcattgcgtcggcggtggacggacaacgtcgacttatcgcagtggtt
atgggggcgaaaagctcaaaaggacgtgaagaacaggcgcgaaaactgttgcagtggggc
cagcaaaattttgcgacagtacagattctgcaccgcggcaaaaaagtgggcagcgagcga
atctggtatggcgacaaagaaaacattgcgctgggtacagaacaggatttctggatggca
ttgcctaaaactgaaattccgaatatcaaagcaaaatatgtgcttgataaaaaagatctg
gaagcgccaattgccgctcatcagcgggtaggggaaatagagctttatgatcgggataaa
ctgatcgcccagtggccgctggtcacgctggaagcgattggtaaaggcagcatgttctct
cgtctgagcgactattttcaccataaagcgtaa
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integrated database retrieval system