Salmonella bongori NCTC 12419: SBG_2037
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Entry
SBG_2037 CDS
T01579
Symbol
yejD
Name
(GenBank) ribosomal small subunit pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
sbg
Salmonella bongori NCTC 12419
Brite
KEGG Orthology (KO) [BR:
sbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbg03009
]
SBG_2037 (yejD)
Enzymes [BR:
sbg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
SBG_2037 (yejD)
Ribosome biogenesis [BR:
sbg03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SBG_2037 (yejD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CCC31098
UniProt:
A0A0K0HC61
LinkDB
All DBs
Position
complement(2220807..2221502)
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AA seq
231 aa
AA seq
DB search
MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIIKNSAFKLLPEHAVAYDGNPLVQQHGP
RYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAYKLHAAGRLDIDTTGLVLMTDDGQWSHR
ITSPRHHCEKTYLVTLESPVADDTAAQFAKGVQLHNEKDLTRPATLEVITPVQVRLTISE
GRYHQVKRMFAAVGNHVVELHRERIGAITLDEDLAPGEYRPLTKEEIASVG
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttgataaatttatcgctcagcagcttggcgtcagccgcgctattgccgggcgt
gaaattcgtggtaaccgtgttaccgttgatggcgaaatcattaaaaattcagctttcaag
ctgctcccggaacatgcggtagcgtatgacggtaatcctttagtgcagcaacatggccca
cgctattttatgcttaataagccgcaggggtacgtctgctcgactgatgaccccgatcat
cccacagtactgtacttcctggatgagccagtggcgtacaagctgcatgcggcaggacgt
ctggatattgatactaccggtctggtgttaatgacggatgatggccagtggtcgcatcgt
attacgtcgccacgccaccactgcgaaaaaacttatctggtgactcttgaatctcctgtt
gcagacgatacggcggcgcagtttgctaaaggcgtgcaattgcataatgaaaaagatctt
accaggcccgctacgctggaggtgatcacgcctgtgcaagtccgtctgaccattagcgaa
gggcgttatcaccaggtgaagcggatgtttgccgcagtaggtaatcatgtagtggaactg
caccgcgaacggattggcgccattactctggatgaggatctggctcccggcgagtatcgt
ccgttgactaaagaagaaatcgccagcgtcggctaa
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