Salmonella bongori NCTC 12419: SBG_2087
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Entry
SBG_2087 CDS
T01579
Symbol
pmrF
Name
(GenBank) putative lipopolysaccharide modification protein
KO
K10012
undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:
2.4.2.53
]
Organism
sbg
Salmonella bongori NCTC 12419
Pathway
sbg00541
Biosynthesis of various nucleotide sugars
sbg01100
Metabolic pathways
sbg01503
Cationic antimicrobial peptide (CAMP) resistance
Module
sbg_M00761
Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N
Brite
KEGG Orthology (KO) [BR:
sbg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SBG_2087 (pmrF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
SBG_2087 (pmrF)
Enzymes [BR:
sbg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.53 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
SBG_2087 (pmrF)
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Gene cluster
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Motif
Pfam:
Glycos_transf_2
Glyco_tranf_2_2
Glyco_tranf_2_3
Glyco_tranf_2_4
DUF726
Motif
Other DBs
NCBI-ProteinID:
CCC31148
UniProt:
A0A0K0HCA5
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All DBs
Position
2280626..2281609
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AA seq
327 aa
AA seq
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MFDAAPIKKVSVVIPVYNEQESLPELIKRTTAACENLGKAWELILIDDGSSDRSAELLVN
ASKEAGSHIITVLLNRNYGQHAAIMAGFSHVNGDLIITLDADLQNPPEEIPRLVAKADEG
FDVVGTVRQNRQDSLFRKSASKIINLLIQRTTGKAMGDYGCMLRAYRRHIIDAMLSCHER
STFIPILANIFARRATEIPVHHAEREFGDSKYSFMRLINLMYDLVTCLTTTPLRLLSLLG
SVIAIGGFSLSVLLVVLRLALGPQWAAEGVFMLFAVLFTFIGAQFIGMGLLGEYIGRIYN
DVRARPRYFIQQVIYPENTPFTEENHQ
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacgccgcaccaataaaaaaagtctcggtggtaattcctgtctataacgaacag
gaaagcctaccggagctgataaaacgtaccactgccgcctgcgaaaatctgggaaaagcg
tgggagctgatattgatagacgacggtagcagtgatagatcggcggagctgttggtcaac
gcgtctaaagaggccggcagccatatcatcactgtcttactcaatcgtaactatggtcaa
catgcggcgatcatggcggggttcagtcatgtaaacggcgatcttatcattacgcttgat
gccgatctgcaaaatccgccggaggagatcccacgtctggtagcaaaggccgatgaaggg
ttcgacgttgtgggtaccgtgcgacaaaatcgacaggacagtctgtttcgcaaatcggcg
tcgaaaattattaatcttctgatccagcgcacaacgggcaaagccatgggcgattacggc
tgtatgttacgcgcctatcgccgtcatattattgatgccatgttgagctgccatgagcga
agcacttttatccctattctggccaatattttcgcccgtcgcgctaccgagattcccgtt
caccatgccgaacgtgaatttggtgattccaaatacagttttatgcggctcattaacctg
atgtatgacctggtaacctgcctgaccactacgcctctgcgtttgttaagcctgctgggc
agcgtcatcgccatcggcggatttagcctgtcagtattgctcgttgtacttcgcctggcg
ctgggaccacagtgggcggcggaaggtgtatttatgctctttgccgtcctgtttactttt
attggcgcgcaattcattggtatggggctactgggcgaatatataggccgcatctataac
gatgtccgcgcccgcccccgctattttattcagcaagttatctatccggaaaacacgcca
ttcactgaggaaaatcaccaatga
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