Salmonella bongori NCTC 12419: SBG_2361
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Entry
SBG_2361 CDS
T01579
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
sbg
Salmonella bongori NCTC 12419
Brite
KEGG Orthology (KO) [BR:
sbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbg03009
]
SBG_2361 (srmB)
Enzymes [BR:
sbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SBG_2361 (srmB)
Ribosome biogenesis [BR:
sbg03009
]
Prokaryotic type
rRNA helicases
SBG_2361 (srmB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
DUF561
Shikimate_DH
AAA_22
CMS1
Mov-10_helical
Motif
Other DBs
NCBI-ProteinID:
CCC31420
UniProt:
A0A0K0HCT6
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All DBs
Position
2587254..2588588
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AA seq
444 aa
AA seq
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MTVTTFSELELDESLLDALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIKDFAERLLKDPVEVSATPSIRERKKIHQWYYRADNYEHKFELLK
HLLKQDDATRTIVFVRKRERVHELAEQLRLAGINNCYLEGEMAQIKRNEGIKRLTDGRVN
VLVATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGTAISLVEAHDHLLL
LKIGRYIEEPLKARVIDELRPITRAPSEKMTGKPSKKVLAKRAEKKKEKEKEKPRVKKRH
RDTKNIGKRRKPSGTQTLEQSSEE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgacgaaagcctgctggatgccctccag
gataaaggattcactcgcccgaccgccattcaggctgccgccattccgcctgcgctcgat
ggccgcgatgtactcggttctgcgccgacaggcaccggtaaaacggcggcatatctgctg
ccggcgttgcagcacttgctcgacttcccgcgtaaaaaatccgggccgccgcgtattctg
atcctgacgccaacccgcgagctggcaatgcaggtggccgatcacgcccgcgaactggcg
aagcatacccatctggatatcgccaccattactggcggcgtcgcgtacatgaaccatgcc
gaagtattcagcgaaaaccaggatatcgtggtcgccaccacgggccgtctgctgcaatat
attaaagaagagaactttgactgccgcgcggttgaaacactgatcctcgacgaggccgac
cggatgctggacatgggctttgctcaggacattgaacatatcgccggggaaacccgttgg
cgtaagcagaccatgctgttctccgcgacactggaaggcgatgcgatcaaagattttgcc
gagcgtctgctgaaagatccggtcgaagtttccgccaccccatccattcgtgagcgtaaa
aagattcatcagtggtattaccgtgcggataactacgagcataagttcgaactgcttaag
cacttactgaagcaggatgatgccacccgtaccatcgtgtttgtgcgtaagcgcgagcgt
gtccatgaactggctgagcaactgcgtctggcggggatcaacaactgctatctcgaaggc
gagatggcgcagatcaaacgcaacgaaggcattaagcgtctcaccgatggccgcgttaac
gtgctggtcgcgaccgacgttgccgcgcgcgggatcgatattcctgacgtaagccacgtt
attaacttcgacatgccgcgcagtggcgatacctacctgcatcgcattggtcgtacaggc
cgtgcggggcgcaaaggcaccgctatttctctggtcgaagcccacgaccatctcctgctg
ttgaagattggccgctacatcgaagagccgctgaaagcgcgtgttattgacgagctacgc
ccgattacgcgtgcacccagtgaaaagatgaccggtaaaccatcgaagaaagtgctggca
aaacgcgccgagaagaaaaaagagaaagaaaaagagaaaccgcgcgtgaagaaacgtcac
cgcgatactaaaaacatcggtaagcgccgcaagccaagcggtacgcagacgctggagcaa
tccagcgaagagtaa
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