Salmonella bongori NCTC 12419: SBG_2599
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Entry
SBG_2599 CDS
T01579
Symbol
recD
Name
(GenBank) exonuclease V alpha-subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sbg
Salmonella bongori NCTC 12419
Pathway
sbg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SBG_2599 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbg03400
]
SBG_2599 (recD)
Enzymes [BR:
sbg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SBG_2599 (recD)
DNA repair and recombination proteins [BR:
sbg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SBG_2599 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
NAT10_TcmA_helicase
UvrD_C_2
Viral_helicase1
SH3_13
AAA_11
UvrD-helicase
AAA_22
SLFN-g3_helicase
nSTAND3
MukB
AAA_16
AAA_28
T2SSE
CbiA
FtsK_SpoIIIE
SRP54
DEAD
TrwB_AAD_bind
UvrD_C
AAA_7
NTPase_1
NPHP3_N
DUF6079_2nd
ATPase
Motif
Other DBs
NCBI-ProteinID:
CCC31650
UniProt:
A0A0K0HDE6
LinkDB
All DBs
Position
complement(2848979..2850814)
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AA seq
611 aa
AA seq
DB search
MTIQERLLEAVRQKLLRPIDAQFALTVAGYDDPAVTLAAALLSRDAGDGHVCLPLSRLTL
TGEAHPLLVSWISETDTPIDWKKRLLASAAVSGGDSPAPLILCGDRLYLNRMWCNERTVA
RFFNEVNQDVEVDEAQLARILDILFPPTDEVNWQKVAAAVALTRRISVISGGPGTGKTTT
VAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGAALRQLPLTDAQKKRIPEDASTL
HRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPPHGRVIFLGDRDQ
LASVEAGAVLGDICAYVNAGFTAERARQLSRLTGSTIPAGTGTQAASLRDSLCLLQKSYR
FGSDSGIGKLAAAINCGDRSAIQAIFQQGFSDIEKRTLQSSDDYAGMLDEALAGYGRYLR
LLHEKAAPEALLQAFSDYQLLCALREGPFGVSGLNDRIEQAMVQQRKIQRHPHSRWYEGR
PVMIARNDSALGLFNGDIGIALDRGQGLRVWFAMPDGTIKSVQPSRLPEHETTWAMTVHK
SQGSEFEHAALILPSQRSPVVTRELVYTAVTRARRRLSLYAEERVLAGAIVTRTERRSGL
SALFDEVSRIE
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacaatccaggagcggttactggaagccgtcagacaaaaattattacggcccattgat
gcccagtttgctttgaccgtcgccggttatgatgatcccgccgtgacgctggcggcagcg
ttgctaagccgtgatgcaggagacggccacgtctgtctgccgctgtcgcgtctgacgtta
acgggggaggcgcatcctttactggtttcgtggataagcgaaacggatacgccaatcgac
tggaaaaaacgtttgctggcgtctgcggcggttagcggtggcgatagccccgcgccgtta
attctgtgcggggatcgtctctatttgaatcgcatgtggtgcaatgagcgtacggtcgcg
cgcttttttaacgaggttaaccaggacgtcgaggttgacgaagcgcaacttgctcgtatt
ctggatatacttttcccgccgacggatgaggtaaactggcaaaaagtggccgccgccgtg
gcactcactcgccgtatttctgtgatttccggcggccctggcaccggtaaaaccacgacc
gtcgcgaagctgctggcggcattaattcaaatggcggatggcgaacgttgccgtatccgg
ctggcggcgccgacgggaaaggcggccgcacgcctgacggagtcgcttggcgcggcgttg
cgccagcttccgctgaccgatgcgcagaaaaaacggataccggaggacgccagtacgctg
caccgcctattaggcgcacagcccggcagccagcgattacgacaccacgcgggtaatcca
ttgcatctggatgtgctggtggtcgatgaagcgtcaatgattgatttaccgatgatgtcg
cgtttgattgacgcgctgccgccacatggtcgggttattttccttggcgatcgcgatcag
ttggcatccgttgaggcgggcgcagtattgggcgatatttgcgcctatgttaatgctggt
ttcacggcggagcgtgcccggcaattgagccgcctgacgggaagtacaattccggccggt
accgggacacaagccgcgtctttgcgcgatagcctctgtttactgcaaaagagctaccgt
tttggcagcgattccggtatcgggaaattggctgcggccattaactgcggtgacagatcg
gcaatccaggctatttttcagcaggggtttagcgatattgaaaagcgcacattgcaaagt
agcgacgattatgcagggatgctggatgaagcgctggcggggtatggtcgctacttgcgg
ttgctgcatgagaaagcggcgccagaggcgctccttcaggcattcagtgattatcaactg
ctttgcgcgttgcgcgaaggcccgtttggtgtaagtgggttgaatgaccgtattgagcag
gcaatggtccagcagcgtaaaattcaacggcatcctcattcccgctggtatgaggggcgg
ccagtgatgattgcgcgcaatgatagcgcgttggggttatttaacggcgatattggcatt
gcgctcgatcgcggacaggggctgcgcgtttggtttgcgatgccggacggcacgatcaag
tccgttcagcccagccgcttgccggagcacgaaaccacctgggcgatgacggtacataaa
tcacaggggtcggaatttgagcacgccgcgctgattctacccagccagcgttcaccggta
gttacgcgagaattagtgtataccgccgttacgcgcgcgcggcgacggttatcactgtac
gctgaggaaagggtactggcaggcgcgattgtgacgcgcacggaacggcgcagcggatta
tcggccttattcgacgaagtcagtcgcatcgaataa
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