Salmonella bongori NCTC 12419: SBG_2912
Help
Entry
SBG_2912 CDS
T01579
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sbg
Salmonella bongori NCTC 12419
Pathway
sbg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SBG_2912 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbg03019
]
SBG_2912 (pnp)
03016 Transfer RNA biogenesis [BR:
sbg03016
]
SBG_2912 (pnp)
Enzymes [BR:
sbg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SBG_2912 (pnp)
Messenger RNA biogenesis [BR:
sbg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SBG_2912 (pnp)
Transfer RNA biogenesis [BR:
sbg03016
]
Prokaryotic type
tRNA degradation factors
SBG_2912 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
KH_2
aRib
OB_RRP5_4th
S1_RRP5
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
CCC31966
UniProt:
A0A0K0HF00
LinkDB
All DBs
Position
complement(3186742..3188877)
Genome browser
AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINEQYVLNPTQDELKESKLDLVVA
GTEAAVLMVESEAELLSEDTMLGAVVFGHEQQQVVIQAINDLVKEAGKPRWDWQPEAVND
ALNARVAQLAESRLSDAYRITDKQERYAQVDVIKSETIETLMAEDETLDANELGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQVLDELMGERTDTFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKYAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQSQPAAAPEAPASEQGE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgatcgttcgtaaattccagtacggtcagcataccgttacgctggaaact
ggcatgatggcgcgtcaggccactgccgccgttatggttagcatggatgacaccgccgta
ttcgttaccgttgtggggcagaaaaaagccaaaccaggccaggatttcttcccgctgacc
gttaactatcaggagcgtacctacgctgctggccgtattccgggtagcttcttccgccgt
gaaggccgtccgagtgaaggcgaaaccctgatcgcgcgtctgattgaccgcccggttcgc
ccactattcccggagggtttcgtcaacgaagtgcaggtcattgcgaccgtggtttccgtg
aatccgcaggttaaccctgacatcgttgcgatgatcggcgcctccgctgcgttgtcgctg
tctggtattccattcaacggccccattggcgcggcgcgcgtgggttatatcaacgagcag
tacgtgttgaacccaacgcaggacgagctgaaagaaagcaaactggatctggtggttgcc
ggtactgaagccgctgtgctgatggtggaatccgaagccgaattgttgagcgaagatacg
atgctgggcgcggtggtattcggtcacgaacagcagcaggtggttatccaggcgatcaac
gacctggtgaaagaggcgggtaaaccgcgttgggactggcagccggaagctgtcaacgac
gccttgaacgcgcgcgtggctcaactggcggagtctcgcctgagcgacgcgtatcgcatc
accgacaaacaagagcgttacgctcaggttgacgtgatcaaatctgaaaccatcgaaacg
cttatggcagaagacgaaaccctggatgctaacgagctgggtgaaattctgcacgcgatc
gagaaaaacgtcgttcgtagccgtgtactggcaggcgaaccgcgtatcgatggccgtgaa
aaagacatgatccgtggtctggacgtgcgtacaggcgtgctgccgcgtacccatggttcc
gcgttgttcacccgtggcgaaacgcaggcactggttactgcaacgctgggtaccgctcgt
gacgcgcaggtgctggatgagttgatgggcgaacgtaccgataccttcttgttccactac
aacttccctccgtactccgtaggcgaaaccggcatggtcggttctccgaagcgtcgtgaa
attggtcacggtcgcctggcgaagcgtggcgtgctggcggtgatgccggatatggacaaa
ttcccgtacaccgttcgcgtggtgtctgagatcactgaatccaacggttcttcctccatg
gcttccgtgtgcggtgcttctctggcgctgatggacgctggcgtgccgatcaaagccgcc
gtggccggtatcgcgatgggcctggtaaaagaaggcgacaactacgttgtgttgtctgat
atcctgggcgacgaagatcacctgggcgatatggacttcaaagtggcgggttcccgcgac
ggtatctctgcgctgcagatggatatcaaaattgaaggcatcaccaaagagatcatgcag
gtagcgctgaatcaagcgaaaggtgcccgtctgcacatcctgggcgtgatggaacaggcg
atcaatgcgccgcgcggcgatatctctgaattcgcaccgcgtattcacaccattaagatc
agtacggacaagatcaaagatgtgatcggtaaaggcggttctgtgatccgtgcgctgacc
gaagaaactggcaccactattgaaatcgaagatgacggtacggtgaagatcgccgcgacc
gacggtgaaaaagcgaaatacgctatccgtcgtattgaagagatcactgcggaaatcgaa
gtgggccgcatctacaatggtaaagtgacccgtatcgttgactttggcgcgtttgttgcc
attggcggcggtaaagaaggtctggttcacatttctcaaattgcggataagcgcgtagag
aaagtgactgactacctgcagatgggccaggaagtcccggttaaagttctggaggttgac
cgccagggccgcgttcgtctgagcattaaagaagcaaccgagcagtctcaacctgcggct
gccccggaagctccggcgagcgaacagggcgagtaa
DBGET
integrated database retrieval system
