Salmonella bongori NCTC 12419: SBG_3481
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Entry
SBG_3481 CDS
T01579
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sbg
Salmonella bongori NCTC 12419
Pathway
sbg00300
Lysine biosynthesis
sbg00470
D-Amino acid metabolism
sbg01100
Metabolic pathways
sbg01110
Biosynthesis of secondary metabolites
sbg01120
Microbial metabolism in diverse environments
sbg01230
Biosynthesis of amino acids
Module
sbg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sbg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SBG_3481 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SBG_3481 (dapF)
Enzymes [BR:
sbg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SBG_3481 (dapF)
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Ortholog
Paralog
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
CCC32528
UniProt:
A0A0K0HFW6
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All DBs
Position
3834801..3835625
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLSDRHLGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLSVTEDELVRVNMGE
PNFEPAQVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDNVDTAAVDTLGPVLE
SHERFPERANIGFMQVVRREHIRLRVYERGAGETRACGSGACAAVAVGIQQGLLAEDVRV
ELPGGRLDIAWKGPGHPLYMTGPAAHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcaattctctaaaatgcatggccttggcaacgactttatggtcgtcgacgcggtaacg
cagaatgtctttttttcgccggagctgattcgccggctgtccgacagacacctgggcgta
gggttcgatcaactattggtggttgagccgccctatgaccctgaactggactttcattac
cggatcttcaacgccgacggcagcgaagtctcgcagtgtggcaacggcgcacgctgtttc
gcacgattcgttcgtctgaaagggctaactaataaacgtgatattcgggtcagtaccgcg
aatggccggatggtgctgagcgtcacagaagatgagctggtgcgggtgaacatgggagag
ccaaactttgaacccgcacaggtcccttttcgcgccaacaaagcggaaaaaacgtatatt
atgcgagcggcggaacagaccatactgtgtggcgtggtttctatgggcaatccgcactgt
gtgattcaggttgataacgtcgacacagcggctgttgacacgctgggaccggttctggaa
agccatgaacgttttccggaacgcgccaatatcggttttatgcaggtcgtaagacgcgag
catatccgcctgcgtgtttatgaacgcggcgcaggagaaacccgcgcgtgcggcagcggt
gcgtgcgccgccgtcgcggtgggaattcagcagggactcctggctgaagacgtacgcgtg
gaattaccgggcggtcgactggatatcgcctggaaaggtccgggtcatccgttatacatg
actggcccggcggcacatgtctacgacggatttatccatttatga
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