Salmonella bongori NCTC 12419: SBG_3485
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Entry
SBG_3485 CDS
T01579
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sbg
Salmonella bongori NCTC 12419
Pathway
sbg03420
Nucleotide excision repair
sbg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SBG_3485 (uvrD)
03430 Mismatch repair
SBG_3485 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbg03400
]
SBG_3485 (uvrD)
Enzymes [BR:
sbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SBG_3485 (uvrD)
DNA repair and recombination proteins [BR:
sbg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SBG_3485 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
SBG_3485 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CCC32532
UniProt:
A0A0K0HFZ6
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All DBs
Position
3838083..3840245
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AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAAPRSNMLVLAGAGSGKTRVLVHRIAWLLSVENNSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQM
RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWVRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAQTIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGVDGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSSDRQLTLWQACRELLQEKALAGRAASALQRFMELVDALAQETADMPLHVQ
TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRLG
TPLAENDTGYKLGQRVRHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYAKLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaatgataaacagcgcgaagcggtggccgcg
ccacgtagcaacatgctggtgctggcgggcgcgggaagcgggaaaacccgtgtactggtg
caccgcatcgcctggctactgagcgtagaaaacaattcgccgtattccatcatggcggtg
acctttaccaacaaagcggcggcggaaatgcgtcatcgtattggccagttgatgggcacc
agccagggggggatgtgggtagggacgttccacggtctggcgcaccgtctgctgcgcgcg
catcatatggacgctaatctgccgcaggatttccagattctcgacagtgaagatcagatg
cgtctgcttaaacgtctgattaaggcgatgaatcttgatgagaagcagtggccgccgcgt
caggcgatgtggtacatcaacagtcagaaagacgaaggactacgcccgcaccatatccaa
agctacggcaatccggtggagcagacctggcagaaggtgtatcaggcctatcaggaagcg
tgcgatcgcgctggcctggtggatttcgctgagctactgctgcgcgctcatgaactatgg
ctgaacaagccgcatatcctgcagcactatcgcgagcgatttactaatatcctggtggac
gaattccaggataccaacaacattcagtacgcctgggttcgtctgctggcgggcgatacc
ggtaaagtgatgattgtcggcgacgatgaccagtcgatctacggctggcgtggagcgcag
gtagaaaatattcagcgcttcctcaatgattttcccggcgcgcagactatccgtctggaa
cagaactaccgttcaaccagcaacattcttagcgcggcgaacgctctgattgagaataac
aacgggcgcctgggtaaaaagctgtggaccgatggcgttgacggcgagccgatttcgctc
tattgcgcctttaacgaactggatgaagcgcgctttgtggttaaccgcatcaaaacctgg
caggacaacggcggcgcgcttgcgcaatgcgccatcctttatcgtagcaacgcccagtcg
cgcgtactggaagaggcgttgttgcaggccagtatgccgtaccgtatttatggcggtatg
cgcttcttcgagcgccaggaaattaaagatgcactctcttatctgcgtttgattgccaac
cgcaacgacgatgcggcgtttgaaagggtggtgaataccccgacgcgtggtatcggcgat
cgtacgcttgatgtggtgcgtcagacctcgagtgaccgccagctaacgttgtggcaggct
tgccgcgaactgctacaggagaaggcgctggctggacgtgcagccagcgcgctacaacgc
tttatggagcttgtcgacgccctggcgcaagagactgctgacatgccgctgcatgtgcag
accgaccgggtgatcaaagactctggcctgcgtaccatgtacgagcaagagaaaggtgaa
aaaggccagacccgtatcgaaaacttagaggagctggtgacagcaacgcgccagtttagc
tacaacgaagaagatgaagacctgatgccgttacaggcgtttctttcccatgcggcgctg
gaggcgggcgaaggacaggcggatacctggcaggatgcggtgcagctcatgacattgcat
tcggcaaaaggactggagtttccgcaggtctttatcgttgggatggaagaagggatgttt
cccagccagatgtcgctggatgaagggggacgtctggaagaggagcgtcgcctggcctac
gtcggcgttacgcgcgccatgcagaagctgaccttaacctatgccgaaacccgtcgtctg
tacggcaaagaggtttaccatcgcccgtcgcgctttatcggcgagctgccggaggagtgt
gtggaagaggtgcgtttgcgcgccactgtcagccgcccggtgagccatcagcgactggga
acgccgctggcggaaaacgatacggggtataagctcgggcagcgggtgcgtcacgcgaag
ttcggcgaagggactattgttaacctggagggcagcggtgagcacagtcgtctgcaggtc
gccttccaggggcagggcatcaaatggttagtggccgcgtatgcgaaactggaaacggtc
tga
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