Salmonella bongori NCTC 12419: SBG_3524
Help
Entry
SBG_3524 CDS
T01579
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sbg
Salmonella bongori NCTC 12419
Pathway
sbg03030
DNA replication
sbg03410
Base excision repair
sbg03420
Nucleotide excision repair
sbg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SBG_3524 (polA)
03410 Base excision repair
SBG_3524 (polA)
03420 Nucleotide excision repair
SBG_3524 (polA)
03440 Homologous recombination
SBG_3524 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbg03032
]
SBG_3524 (polA)
03400 DNA repair and recombination proteins [BR:
sbg03400
]
SBG_3524 (polA)
Enzymes [BR:
sbg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SBG_3524 (polA)
DNA replication proteins [BR:
sbg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SBG_3524 (polA)
DNA repair and recombination proteins [BR:
sbg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SBG_3524 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SBG_3524 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Prok-E2_E
HHH_5
HHH_2
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
CCC32571
UniProt:
A0A0K0HGP4
LinkDB
All DBs
Position
3885566..3888352
Genome browser
AA seq
928 aa
AA seq
DB search
MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYQPTHAAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT
LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPDEVVNKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDRLYAEPEKIAGLTFRGAKTMAGKLAQHK
EVAYLSYQLATIKTDVELELTCEQLEVQQPVADVLLDLFKKYEFKRWTVDVESGKWLQAK
GAKPAAKPQETIVIDESSSEPAATLSYENYVTILDEATLESWIEKLQKAPVFAFDTETDS
LDNIAANLVGLSFAIEPGVAAYIPVAHDYLDAPDQIPRERALELLKPLLEDENARKVGQN
LKYDRGILQNYGIELRGIAFDTMLESYILNSVAGRHDMDSLSDRWLKHKTITFEEIAGKG
KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPELQQHKGPLNVFENIEMPLVPVLSRV
ERNGVKIDPAVLHKHSEEITLRLAELEKKAHDIAGEAFNLSSTKQLQTILFEKQGIKPLK
KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPETGRVHTSYH
QAVTATGRLSSTDPNLQNIPVRNDEGRRIRQAFIAPEDYLIVSADYSQIELRIMAHLSRD
KGLLTAFAEGKDIHRATAAEVFGLPLDSVTGEQRRSAKAINFGLIYGMSAFGLSRQLNIP
RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLEGRRLYLPDIKSSNAARRAGAE
RAAINAPMQGTAADIIKRAMIAVDEWLQKEQPRVRMIMQVHDELVFEVHKDSLDAVSKRI
HQLMENCTRIDVPLLVEVGSGENWDQAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatcccagaaaacccacttattctcgtagatggctcatcctatctctatcgc
gcatatcatgcgtttccgccgttaactaacagcgcgggagaacctacgggcgcaatgtat
ggtgtcctcaatatgttgcgcagcctgatcatgcagtatcagccgacgcatgctgcggtg
gtgtttgacgctaaaggaaaaaccttccgtgatgaactctttgaacattacaaatcgcat
cgtcctccaatgccagatgatttacgggcgcaaatagagccgttacatgccatggttaaa
gcgatgggtctgccgctgttggcggtttctggcgtagaggcggacgatgtcatcggcact
ctggcgcgcgaagcggaaaaagcaggccgcccggtattaatcagtaccggcgataaagat
atggcgcaactggtgacgccgaatatcacgctgatcaacacgatgaccaacactattctt
ggcccggatgaagtcgtcaataagtacggcgtgccaccggaactgattatcgactttctg
gcgctgatgggggactcttctgataatatccctggtgtcccgggggtgggggagaagacg
gcgcaagctttgcttcagggattaggcggcctggataggctgtacgccgagccggaaaaa
attgctggtcttactttccgcggcgccaaaacgatggcaggtaaattagcgcagcataaa
gaagtggcgtacctgtcttatcaactggccaccattaaaacagatgttgagctggagctg
acctgcgaacagcttgaagtccaacagccagtggcggatgtactactggatctgtttaaa
aaatatgagtttaagcgctggacggtggacgttgagtccggcaagtggctacaggcaaaa
ggcgcgaaaccagcggccaaaccccaggaaacgatcgttattgatgaatcgtccagcgag
cctgcggcaacgctctcttatgaaaactatgtcactattcttgacgaggccacgctggag
agctggattgaaaagctacaaaaggcgccggtttttgctttcgataccgaaaccgacagc
ctggataatatcgccgccaatttggtggggctctcttttgccattgaacccggcgttgcc
gcgtatatacctgtcgcgcatgattatctggatgctccggatcaaatcccccgtgagcgt
gcgctggagttgctgaagccgctactggaagatgaaaatgcgcggaaggtggggcaaaac
ctcaaatacgatcgcggtatcttgcagaactatggcattgagctgcgcggtatcgccttc
gataccatgctggagtcttacattctgaacagtgtcgccggacgtcacgatatggatagc
ctgtccgatcgttggctgaagcacaaaacgatcacctttgaagaaattgctggtaaaggt
aaaaaccagctgacctttaatcagattgcactggaggaagcagggcgttatgcggcagaa
gatgcggatgtcacgctacaactgcatcttaaaatgtggcctgaactccagcagcataaa
gggccgctgaatgttttcgaaaacatcgaaatgccactggtgccagtactgtcgcgcgtt
gagcgcaacggcgtgaaaatcgatcctgctgtcctgcacaaacattcggaagaaattacg
ctacgtctggcggaactggagaagaaagcgcatgacattgcgggtgaggcatttaacctc
tcctcgacgaagcagctacagaccatcctgtttgaaaaacagggcatcaagccgctgaag
aaaacgccaggcggcgcgccgtcaacgtcggaagaggtactggaagagctggcgctggac
tatccattgccgaaagtgattctggagtatcgtgggctggcgaagctaaaatccacctat
accgataagctaccgttgatgattaacccggaaaccgggcgcgtccacacgtcctatcat
caggctgtgacggcaacgggacgtttatcgtccaccgacccgaacctgcaaaatattcca
gtgcgtaatgatgaaggccgccgtattcgtcaggcatttatcgcgcctgaagattatctc
attgtgtcggcggactattcacagattgagctgcgtattatggcgcatctttcccgtgat
aaaggactgcttacggcgttcgccgaagggaaagatattcaccgcgcaacggcggcggaa
gtctttggcctaccgctggatagcgtgaccggtgaacagcgccgaagtgcgaaagccatt
aactttggcctgatttacggtatgagcgcctttggtctttctcgccagcttaatatcccg
cgtaaagaggcgcagaagtacatggatctctacttcgaacgctaccctggcgtgctggaa
tatatggaacgcacccgcgcccaggcaaaagagcagggctacgttgaaacactggaaggg
cgccgcctttacttgccggatatcaaatccagcaatgcggcgcggcgcgctggcgccgag
cgcgcagcaatcaacgccccgatgcagggaaccgccgcagacattattaaacgcgcaatg
atcgccgtggatgaatggctgcaaaaggaacaaccacgcgtgcgtatgatcatgcaggta
cacgatgaactggtgtttgaagtacataaagactccctggacgcggtatcaaaacgtatc
catcaattgatggaaaactgtacgcgtattgatgtgccgttgctggtggaagtcggaagc
ggagaaaactgggatcaagcgcactaa
DBGET
integrated database retrieval system