KEGG   Salmonella bongori NCTC 12419: SBG_3524
Entry
SBG_3524          CDS       T01579                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
sbg  Salmonella bongori NCTC 12419
Pathway
sbg03030  DNA replication
sbg03410  Base excision repair
sbg03420  Nucleotide excision repair
sbg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sbg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SBG_3524 (polA)
   03410 Base excision repair
    SBG_3524 (polA)
   03420 Nucleotide excision repair
    SBG_3524 (polA)
   03440 Homologous recombination
    SBG_3524 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sbg03032]
    SBG_3524 (polA)
   03400 DNA repair and recombination proteins [BR:sbg03400]
    SBG_3524 (polA)
Enzymes [BR:sbg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SBG_3524 (polA)
DNA replication proteins [BR:sbg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     SBG_3524 (polA)
DNA repair and recombination proteins [BR:sbg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     SBG_3524 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SBG_3524 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH Prok-E2_E HHH_5 HHH_2 WHD_BrxR
Other DBs
NCBI-ProteinID: CCC32571
UniProt: A0A0K0HGP4
LinkDB
Position
3885566..3888352
AA seq 928 aa
MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYQPTHAAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT
LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPDEVVNKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDRLYAEPEKIAGLTFRGAKTMAGKLAQHK
EVAYLSYQLATIKTDVELELTCEQLEVQQPVADVLLDLFKKYEFKRWTVDVESGKWLQAK
GAKPAAKPQETIVIDESSSEPAATLSYENYVTILDEATLESWIEKLQKAPVFAFDTETDS
LDNIAANLVGLSFAIEPGVAAYIPVAHDYLDAPDQIPRERALELLKPLLEDENARKVGQN
LKYDRGILQNYGIELRGIAFDTMLESYILNSVAGRHDMDSLSDRWLKHKTITFEEIAGKG
KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPELQQHKGPLNVFENIEMPLVPVLSRV
ERNGVKIDPAVLHKHSEEITLRLAELEKKAHDIAGEAFNLSSTKQLQTILFEKQGIKPLK
KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPETGRVHTSYH
QAVTATGRLSSTDPNLQNIPVRNDEGRRIRQAFIAPEDYLIVSADYSQIELRIMAHLSRD
KGLLTAFAEGKDIHRATAAEVFGLPLDSVTGEQRRSAKAINFGLIYGMSAFGLSRQLNIP
RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLEGRRLYLPDIKSSNAARRAGAE
RAAINAPMQGTAADIIKRAMIAVDEWLQKEQPRVRMIMQVHDELVFEVHKDSLDAVSKRI
HQLMENCTRIDVPLLVEVGSGENWDQAH
NT seq 2787 nt   +upstreamnt  +downstreamnt
atggttcagatcccagaaaacccacttattctcgtagatggctcatcctatctctatcgc
gcatatcatgcgtttccgccgttaactaacagcgcgggagaacctacgggcgcaatgtat
ggtgtcctcaatatgttgcgcagcctgatcatgcagtatcagccgacgcatgctgcggtg
gtgtttgacgctaaaggaaaaaccttccgtgatgaactctttgaacattacaaatcgcat
cgtcctccaatgccagatgatttacgggcgcaaatagagccgttacatgccatggttaaa
gcgatgggtctgccgctgttggcggtttctggcgtagaggcggacgatgtcatcggcact
ctggcgcgcgaagcggaaaaagcaggccgcccggtattaatcagtaccggcgataaagat
atggcgcaactggtgacgccgaatatcacgctgatcaacacgatgaccaacactattctt
ggcccggatgaagtcgtcaataagtacggcgtgccaccggaactgattatcgactttctg
gcgctgatgggggactcttctgataatatccctggtgtcccgggggtgggggagaagacg
gcgcaagctttgcttcagggattaggcggcctggataggctgtacgccgagccggaaaaa
attgctggtcttactttccgcggcgccaaaacgatggcaggtaaattagcgcagcataaa
gaagtggcgtacctgtcttatcaactggccaccattaaaacagatgttgagctggagctg
acctgcgaacagcttgaagtccaacagccagtggcggatgtactactggatctgtttaaa
aaatatgagtttaagcgctggacggtggacgttgagtccggcaagtggctacaggcaaaa
ggcgcgaaaccagcggccaaaccccaggaaacgatcgttattgatgaatcgtccagcgag
cctgcggcaacgctctcttatgaaaactatgtcactattcttgacgaggccacgctggag
agctggattgaaaagctacaaaaggcgccggtttttgctttcgataccgaaaccgacagc
ctggataatatcgccgccaatttggtggggctctcttttgccattgaacccggcgttgcc
gcgtatatacctgtcgcgcatgattatctggatgctccggatcaaatcccccgtgagcgt
gcgctggagttgctgaagccgctactggaagatgaaaatgcgcggaaggtggggcaaaac
ctcaaatacgatcgcggtatcttgcagaactatggcattgagctgcgcggtatcgccttc
gataccatgctggagtcttacattctgaacagtgtcgccggacgtcacgatatggatagc
ctgtccgatcgttggctgaagcacaaaacgatcacctttgaagaaattgctggtaaaggt
aaaaaccagctgacctttaatcagattgcactggaggaagcagggcgttatgcggcagaa
gatgcggatgtcacgctacaactgcatcttaaaatgtggcctgaactccagcagcataaa
gggccgctgaatgttttcgaaaacatcgaaatgccactggtgccagtactgtcgcgcgtt
gagcgcaacggcgtgaaaatcgatcctgctgtcctgcacaaacattcggaagaaattacg
ctacgtctggcggaactggagaagaaagcgcatgacattgcgggtgaggcatttaacctc
tcctcgacgaagcagctacagaccatcctgtttgaaaaacagggcatcaagccgctgaag
aaaacgccaggcggcgcgccgtcaacgtcggaagaggtactggaagagctggcgctggac
tatccattgccgaaagtgattctggagtatcgtgggctggcgaagctaaaatccacctat
accgataagctaccgttgatgattaacccggaaaccgggcgcgtccacacgtcctatcat
caggctgtgacggcaacgggacgtttatcgtccaccgacccgaacctgcaaaatattcca
gtgcgtaatgatgaaggccgccgtattcgtcaggcatttatcgcgcctgaagattatctc
attgtgtcggcggactattcacagattgagctgcgtattatggcgcatctttcccgtgat
aaaggactgcttacggcgttcgccgaagggaaagatattcaccgcgcaacggcggcggaa
gtctttggcctaccgctggatagcgtgaccggtgaacagcgccgaagtgcgaaagccatt
aactttggcctgatttacggtatgagcgcctttggtctttctcgccagcttaatatcccg
cgtaaagaggcgcagaagtacatggatctctacttcgaacgctaccctggcgtgctggaa
tatatggaacgcacccgcgcccaggcaaaagagcagggctacgttgaaacactggaaggg
cgccgcctttacttgccggatatcaaatccagcaatgcggcgcggcgcgctggcgccgag
cgcgcagcaatcaacgccccgatgcagggaaccgccgcagacattattaaacgcgcaatg
atcgccgtggatgaatggctgcaaaaggaacaaccacgcgtgcgtatgatcatgcaggta
cacgatgaactggtgtttgaagtacataaagactccctggacgcggtatcaaaacgtatc
catcaattgatggaaaactgtacgcgtattgatgtgccgttgctggtggaagtcggaagc
ggagaaaactgggatcaagcgcactaa

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