Salmonella bongori NCTC 12419: SBG_3619
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Entry
SBG_3619 CDS
T01579
Symbol
trmA
Name
(GenBank) tRNA (uracil-5)-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
sbg
Salmonella bongori NCTC 12419
Brite
KEGG Orthology (KO) [BR:
sbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbg03016
]
SBG_3619 (trmA)
Enzymes [BR:
sbg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
SBG_3619 (trmA)
Transfer RNA biogenesis [BR:
sbg03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
SBG_3619 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
Cons_hypoth95
Methyltransf_15
MTS
DUF3164
Methyltransf_11
Methyltransf_12
PrmA
Methyltransf_31
Met_10
COLFI
Motif
Other DBs
NCBI-ProteinID:
CCC32664
UniProt:
A0A0K0HG89
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All DBs
Position
complement(3993652..3994752)
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AA seq
366 aa
AA seq
DB search
MTPEHLPTEQYDAQLAEKVARLQSMMAPFSGLVPEVFRSPVSHYRMRAEFRLWHDGDDLY
HIMFDQQTKNRIRVDSFPAASQLINTLMKAMIVGVRDNHVLRHKLFQIDYLTTLSNQAVV
SLLYHKKLDETWREAASALRDALRAQGLNVHLIGRATKTKIELDQDYIDERLPVAGREMI
YRQVENSFTQPNAAMNIQMLEWALDVTKGSTGDLLELYCGNGNFSLALARNFDRVLATEI
AKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDP
PRSGLDSETEKMVQAYPRILYISCNPETLCKNLETLSQTHTVSRLALFDQFPYTHHMECG
VLLTAK
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgacccccgaacatcttccgacagaacagtatgacgcgcagctggctgaaaaagtggcg
cgcctgcagagtatgatggcgccgttttctggcctggttccggaagtctttcgctcgccg
gtcagtcattatcgtatgcgcgcagagtttcgcctgtggcatgatggcgatgatctgtac
cacattatgtttgatcagcagactaaaaaccggattcgtgttgacagcttcccggcggcc
agccaactgattaatactttaatgaaggcgatgattgtcggcgtgcgcgataatcacgta
ctgcggcataagctgttccagatcgattaccttaccaccctcagcaaccaggcggtggta
tcattgctgtaccataaaaagctggacgaaacgtggcgtgaagccgcttcagcgttgcgc
gacgctttgcgcgcgcaagggctgaacgtacatttgattggccgggccaccaaaacaaaa
atcgaactggatcaggactacatcgacgagcgtctgccagtggcaggcagagagatgatc
taccgccaggtggaaaatagctttacccagcccaatgccgcaatgaacattcagatgctg
gagtgggcgctggatgtcacaaaagggtcgacaggcgatctgctggagctttattgtggc
aacggcaatttttctttagcgctggcgcgtaatttcgaccgcgtactggcaaccgaaatc
gccaaaccgtccgtcgcggctgcacagtacaatattgctgctaatcatattgataatgtg
cagatcattcgcatggcggcggaagagtttactcaggcgatgaacggtgtgcgtgagttt
aaccgtctgcaggggatcgatctgaaaagctatcagtgcgaaaccatttttgtcgatccg
ccgcgcagcggcctggacagcgaaacagaaaaaatggtacaggcctatccccgtatcctg
tacatttcctgcaatccggaaacgttgtgcaaaaacctggaaacgttaagccagacgcac
acggtatctcgcctggcgctgttcgatcagtttccgtatacacatcatatggagtgcggt
gtgttgttaaccgcaaagtaa
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