Salmonella bongori NCTC 12419: SBG_3847
Help
Entry
SBG_3847 CDS
T01579
Symbol
cpdB
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
sbg
Salmonella bongori NCTC 12419
Pathway
sbg00230
Purine metabolism
sbg00240
Pyrimidine metabolism
sbg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sbg00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
SBG_3847 (cpdB)
00240 Pyrimidine metabolism
SBG_3847 (cpdB)
Enzymes [BR:
sbg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
SBG_3847 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
SBG_3847 (cpdB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
PGA_cap
Motif
Other DBs
NCBI-ProteinID:
CCC32888
UniProt:
A0A0K0HHJ9
LinkDB
All DBs
Position
complement(4286796..4288739)
Genome browser
AA seq
647 aa
AA seq
DB search
MIKFSATLLATLIAASVNAATVDLRIMETTDLHSNMMDFDYYKDTATEKFGLVRTASLIN
AARNEVKNSVLVDNGDLIQGSPLGDYVATKGLKKGDIHPVYKALNTLDYAVGNLGNHEFN
YGLDYLHNALAGAKFPYVNANIIDIKTQKPLFTPYLIKETNVIDKDGNPQTLKIGYIGFV
PPQIMIWDKANLSGKVTVNDITQTARKYVPEMREKGADIVVVIAHSGLSADPYHSMAENS
VYYLSEVPGVDAIMFGHAHAVFPGKDFADIKGANIAKGTLNGIPAVMPGMWGDHLGVVDL
VLNNDSGKWQVTQAKAEARPIYDAAAKKSLAAEDRKLVAILKADHNATREFVSKPIGKSA
DNMYSYLALVQDDPTVQVVNNAQKAYVEHVIQGDPDLAKLPVLSAAAPFKVGGRKNDPAS
FVEVEKGPLTFRNAADLYLYPNTLVVVKASGKEIKEWLECSAGQFNQIDIHSNKPQSLIN
WDGFRTYNFDVIDGVNYQIDVTQPARYDGECQMVNPQAERIKNLTFNGKPVDPNATFLVA
TNNYRAYGGKFAGTGDSHIAFASPDENRSVLAAWIGAESKRAGEIHPAADNNWRLAPVHS
DTTLDIRFETSPGDKAAAFIKEKGQYPMKKVAADDIGFALYQVDLTK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgattaagtttagtgcaacgcttctggctacgctgatcgccgccagcgtgaatgcggct
accgtcgatctccgtatcatggaaactactgatttacatagtaatatgatggatttcgat
tattacaaggataccgcaaccgaaaaattcggattggtacgtaccgcaagtttgattaat
gccgcccgaaatgaagtcaaaaacagcgtgctggtggataacggcgacctgattcaggga
agtccactgggtgactatgtggcgacaaaagggcttaaaaaaggggatattcacccggtc
tataaagcgctcaacactctggattacgcggtaggaaacctcggcaatcatgaatttaat
tatggtctggactacctgcataacgcactggccggcgcgaaattcccttatgttaacgcc
aatattatcgatattaagacccaaaagccgctctttacgccttatctgattaaagagaca
aacgtgattgataaagacggcaatccacaaacgttaaaaatcggttatatcggcttcgtc
ccgccgcagattatgatctgggataaagcgaatctgagcgggaaagtcacggtgaacgac
atcacacaaaccgcccggaaatatgtacctgaaatgcgcgagaaaggcgctgatatcgtg
gtggtgattgcgcactcaggcctttctgccgatccttaccacagcatggcggaaaactca
gtttattacctcagtgaggtccccggcgtagacgctattatgtttggccacgcgcacgcg
gtcttcccgggcaaagattttgccgacatcaaaggcgcgaatatcgccaaaggtacgctt
aacggcattcctgcggtaatgcctggcatgtggggcgaccatctgggcgtggtcgatctg
gtgctcaataacgacagcggcaagtggcaggtcacgcaggcgaaagcggaagcgaggccc
atttacgacgccgccgctaaaaagtcgctggcggcggaagaccgtaagctggtggcgatt
ctgaaagccgaccacaatgctacccgcgagtttgtcagcaagcctatcggtaaatccgcc
gataacatgtacagttatcttgctctggtgcaggacgatcctaccgtacaggtggtgaat
aacgcacaaaaagcgtatgtggaacacgttattcagggcgatccggatctggcgaaactg
ccggtactttccgctgccgcgccatttaaagtcgggggacgtaaaaacgatcccgccagc
ttcgtcgaggtagaaaaaggcccgttgaccttccgtaacgccgccgatctttatctctat
cccaatactctggtggtggtgaaagccagcggcaaagagataaaagagtggctggaatgt
tctgccggacagtttaaccaaatagatatccacagcaacaaaccacaatcattgatcaac
tgggacggtttccgcacctataacttcgatgttattgacggcgtgaattatcaaatcgat
gtgacacagcccgcccgctatgatggcgaatgccagatggtgaatccccaggcagaacga
attaaaaatctgacctttaacggtaagcctgtcgacccgaacgccacattcctggtcgcc
acgaataactatcgcgcttacggtggcaagtttgccggtacaggcgacagccatatcgcc
tttgcgtctccggatgaaaatcgctccgtactggcggcatggattggcgcagagtctaaa
cgcgcgggtgaaatccatccagcggcggataataactggcgactggcgccagtccacagc
gatacaacgctggatatccgttttgaaacctcaccgggcgataaagccgccgcctttatc
aaagagaaaggacagtatcccatgaaaaaagtcgccgccgatgatatcggttttgctctt
tatcaggttgatttaactaagtaa
DBGET
integrated database retrieval system
