Streptomyces bingchenggensis: SBI_00880
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Entry
SBI_00880 CDS
T01678
Name
(GenBank) AraC family transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sbh
Streptomyces bingchenggensis
Pathway
sbh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SBI_00880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbh03000
]
SBI_00880
03400 DNA repair and recombination proteins [BR:
sbh03400
]
SBI_00880
Enzymes [BR:
sbh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SBI_00880
Transcription factors [BR:
sbh03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SBI_00880
DNA repair and recombination proteins [BR:
sbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SBI_00880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF6233
Motif
Other DBs
NCBI-ProteinID:
ADI04001
UniProt:
D7C613
LinkDB
All DBs
Position
1280218..1281750
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AA seq
510 aa
AA seq
DB search
MTDDSKYEAVCSRDSRFDGEFFLAVSTTGIYCRPSCPANTPKRKNVRFFTTAAAAQGAGF
RACRRCRPDAVPGSAEWNTRADVVGRAMRLIGDGVVDREGVAGLAGRLGYSSRQVQRQLN
AELGAGPLALARAQRGHTARILLQTTSMQAAEIAFAAGFASVRQFNDTIREIYAATPSEL
RAARPGQGARFGPVGSQDGAAGIPLRLAFRGPYASAEVFDYLGARTLAGAEEITGERGAR
VYRRTLRLPNGAGIAEVGETPGAGGWLECRLHLADLRDLTTATQRVRRLFDLDADPYAVG
ERLGADPALAPLVALRPGLRAPGAADPHELAVRAVLGQQVSVAAGRRLGEALLAAYGEPL
RTPSGGLTRLFPSAERLAEAALGELGMPDSRRDTVRAVSAALADGAVRLDPGADRDEAEK
ALLGLRGVGPWTAGYIRMRALSDPDVLLTADVAVRAGMRATGAAAVDSEAWRPWRSYAMH
HFWNAAKDRGDFKRDTHEAHDEHEHERKDR
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgacagcaagtacgaggcggtgtgcagccgcgactcccggttcgacggcgag
ttcttcctcgccgtctccacgaccggcatctactgccggccgagctgccccgcgaacacg
cccaagcgcaagaacgtccgcttcttcacgaccgcggccgcggcccagggcgccggcttc
cgggcctgccgtcgttgccgcccggacgcggtgcccgggtccgcggagtggaacacccgg
gccgatgtggtcggccgggcgatgcggctgatcggtgacggcgtcgtcgaccgcgaaggc
gtggccgggctcgccggacggctgggctacagctcccggcaggtacagcgccaactcaac
gccgagctgggcgcgggcccgctcgcgctcgcgcgggcccagcgcggtcacaccgcgcgg
atcctgctccagaccacctccatgcaggccgccgagatcgctttcgcggccggcttcgcc
agcgtgcggcagttcaacgacaccatccgcgagatctacgccgccacgcccagcgagctg
cgcgccgcccgccccgggcagggcgcgcgcttcggtccggtcggctcccaggacggcgcg
gccgggataccgctgcggctcgccttccgcggtccgtacgcctccgccgaggtcttcgac
tacctgggcgcccgcaccctcgccggcgccgaggagatcaccggcgagcgcggcgcccgc
gtctaccggcgcaccctgcggctgccgaacggcgccgggatcgcggaggtcggcgagaca
cccggcgcgggcggctggctggagtgccggctgcacctggccgatctgcgcgatctgacc
accgccacccagcgggtgcgccgcctgttcgacctggacgccgacccgtacgcggtcggc
gagcggctgggcgcggaccccgcgctcgccccgctggtcgccctgcggcccgggctgcgc
gcgcccggcgcggccgatccgcacgagctggcggtccgcgcggtgctgggccagcaggtc
tcggtggccgccggccgcaggctcggcgaggcactgctggcggcgtacggcgagccgctg
cgcacgccgagcggcgggctgacccggctcttcccgagcgcggagcggctggccgaggcg
gcgctcggcgagctcgggatgccggactcgcgccgtgacaccgtgcgcgccgtcagcgcg
gcactcgccgacggcgccgtccggctcgaccccggcgccgaccgggacgaggccgaaaag
gcgctcctgggtcttcgcggcgtcggcccctggacggccggctacatccgcatgcgggcg
ctgagcgacccggatgtgctgctgaccgcggatgtggccgtacgggccgggatgcgggcg
acgggcgccgcggcggtcgactccgaggcctggcggccctggcgcagctacgccatgcac
cacttctggaacgccgccaaggaccgcggcgacttcaagcgcgatacgcacgaggcgcac
gacgagcacgaacacgaaaggaaagaccgatga
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