Streptomyces bingchenggensis: SBI_02159
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Entry
SBI_02159 CDS
T01678
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sbh
Streptomyces bingchenggensis
Pathway
sbh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SBI_02159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbh03019
]
SBI_02159
03400 DNA repair and recombination proteins [BR:
sbh03400
]
SBI_02159
Enzymes [BR:
sbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SBI_02159
Messenger RNA biogenesis [BR:
sbh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SBI_02159
DNA repair and recombination proteins [BR:
sbh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SBI_02159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
ADI05280
UniProt:
D7BT65
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All DBs
Position
2933566..2935401
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AA seq
611 aa
AA seq
DB search
MSDALRVLRRVFGYDAFRGDQQEIIDHVVAGGDALVLMPTGGGKSLCYQIPALVRRGVGV
VVSPLIALMQDQVDALRALGVRAGFLNSTQDLDERRLVEAEFLAGELDLLYLAPERLRVE
STLSLLGRGSISLFAIDEAHCVAQWGHDFRPDYLALSELHERWPDVPRIALTATATEATH
SEIASRLKLQDARHFVASFDRPNIQYRIAPKNDPKRQLLELLRTEHQGHAGIIYCLSRAS
VEKTAEFLVKNGIEALPYHAGLDARIRAENQARFLREDGLVVVATIAFGMGIDKPDVRFV
AHLDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLQDVVQQRKMIDGSEGDAAHRRRLGSH
LDAMLALCETVECRRVGLLAYFGQQSTACGNCDTCLTPAESWDGTVPAQKLLSTVVRLKR
ERNQKFGAGQVVDILLGKKTAKVIQFDHDALSVFGIGAELREAEWRGVVRQLLAQGLIAV
EGDYGTLVLSEGSGEVLGGQRQVMLRREPERAPRAAKSSSSAGTKSGRAAAPVDLPPEAV
PLFERLRAWRGATAKEQGVPAYVIFHDATLRQIATLSPSTLAELGAVSGVGENKLAKYGE
QILETVAAAEE
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgcgctgcgcgtgctgcgccgggtcttcggctatgacgcgttccggggcgat
cagcaagagatcatcgaccatgtcgtggccgggggcgacgccctggttctgatgccgacc
ggcggcggcaaatcgctgtgctaccagatccccgcgctcgtccgccgcggcgtcggcgtc
gtcgtctcaccgctcatcgcactgatgcaggaccaggtcgacgcgttgcgggcgctcggc
gtacgggccgggttcctcaactccacccaggacctggacgagcggcggctggtcgaggcg
gaattcctcgcgggcgagctggacctgctgtacctcgcgccggagcggctgcgggtggag
tcgacgctctcgctgctgggccggggctcgatctcgctgttcgccatcgacgaggcgcac
tgtgtggcccagtgggggcacgacttccgccccgactatctggcgctgtccgagctgcac
gagcgctggcccgatgtgccgcgtatcgcgctgaccgcgaccgccaccgaggccacccac
tccgagatcgcctcccggctcaagctgcaggacgcccgccacttcgtggcgagcttcgac
cggccgaacatccagtaccgcatcgcgcccaagaacgaccccaagcggcagctgctggag
ctgctgcgcaccgagcaccaggggcacgcgggcatcatctactgcctgtcgcgtgcctcg
gtcgagaagaccgccgagttcctggtgaagaacgggatcgaggcgctgccgtaccacgcg
ggtctcgacgcccggatccgggccgagaaccaggcgcggtttctgcgggaggacgggctg
gtcgtggtcgccacgatcgcgttcggcatgggcatcgacaagcccgacgtacggttcgtc
gcccatctcgatctgcccaagtcggtcgagggctactaccaggagacgggccgggccggg
cgggacgggctgccctccaccgcctggctggcctatggcctccaggacgtcgtccagcag
cgcaagatgatcgacggctcggagggcgacgcggcccaccgccgccgcctcggcagccac
ctcgacgcgatgctggcgctgtgcgagacggtcgagtgccgccgggtggggctgctggcc
tacttcggtcagcagagcaccgcatgcggcaactgcgatacgtgtctgacgcccgcggag
tcctgggacggcaccgtccccgcgcagaagctgctgtcgaccgtcgtacggctcaagcgg
gagcggaaccagaagttcggcgccggccaggtggtcgacatcctgctcggcaagaagacc
gccaaggtgatccagttcgaccatgacgcgctgtccgtgttcgggatcggcgcggagctg
cgcgaggccgaatggcggggcgtggtgcgccagttgctcgcccaggggctgatcgccgtg
gagggcgactacggcacgctggtgctctccgagggcagcggcgaggtgctgggcgggcag
cgccaggtgatgctgcggcgcgagccggagcgtgcgccacgggccgcgaagtcctcgtcg
tcggcgggcaccaagtccggccgcgccgccgccccggtggacctgccgccggaggcggtg
ccgctgttcgagcggctgcgcgcctggcgcggggccaccgccaaggagcagggcgtcccg
gcgtatgtgatcttccacgacgccacgctgcgccagatcgccacgctgtcgcccagcacc
ctggcggagctcggcgcggtcagcggcgtcggcgagaacaagctggccaagtacggggag
cagattctggaaacggtcgcggcagcggaggagtga
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