Streptomyces bingchenggensis: SBI_02903
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Entry
SBI_02903 CDS
T01678
Name
(GenBank) exonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sbh
Streptomyces bingchenggensis
Pathway
sbh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SBI_02903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbh03400
]
SBI_02903
Enzymes [BR:
sbh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SBI_02903
DNA repair and recombination proteins [BR:
sbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SBI_02903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ADI06024
UniProt:
D7C4H3
LinkDB
All DBs
Position
complement(3804917..3805939)
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AA seq
340 aa
AA seq
DB search
MRIATWNVNSITARLPRLLAWLESSGTDVLCIQEIKSAESAFPYEPLRELGYEAAVNATG
RWNGVGVISRVGLADVTPGLPGGPDYEGEQEPRAIAATCGGVRVQSVYVPNGREIGHPHY
DYKLRWFEALRTSAAVDAAGGRAPRRGRRGGRRPLRRPRRLQCGAGRRGRMGPRRLRGLD
ACHHQGARGAGRPARGGPVRCDAAPPEVRPPLHLLGLPGAGLPEEQGHADRPGVWQRGLH
QGRERCVCGPRGAQGQGRLGPRAGRRRPRHLTPPTGAWPGPRVSRSAAADRSSRPSPAAP
CRRGADGRRCRRRAGSAAAAADPAPPRRSPAPRRTPRRCP
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgcgacctggaacgtcaattcgatcaccgcgcggctgccccgcctgctcgcc
tggctggagagcagcggtacggacgtgctgtgcatacaggagatcaagagcgccgagagc
gccttcccctacgagccgctgcgcgagctcggctatgaggccgcggtcaacgccaccggc
cggtggaacggggtgggggtgatctcccgcgtcggcctggcggacgtgaccccgggcctg
cccggcggcccggactacgagggcgagcaggagccccgcgccatcgccgcgacctgcggc
ggcgtccgcgtccagtcggtgtacgtgcccaacggccgggagatcgggcacccccactac
gactacaagctgcgctggttcgaggcgctgcggacctccgccgctgtcgacgcggcgggc
gggcgggccccccgccgcggtcgacgcggcggccggcggccccttcgccgtcctcggcga
cttcaatgtggcgccggccgacgaggacgtatgggaccgcgccgtcttcgagggctcgac
gcatgtcaccaccaaggagcgcgaggcgctggccgccctgcgcgaggtgggcctgtccga
tgtgatgccgcgccccctgaagtacgaccaccccttcacctactgggactaccgggagct
gggcttcccgaagaacaagggcatgcggatcgacctggtgtatggcaacgaggccttcac
caaggccgtgagcgatgcgtatgtggaccgcgaggagcgcaagggcaagggcgcctcgga
ccacgcgccggtcgtcgtagacctcgacatctgacgcctccgaccggcgcgtggcccggc
ccgcgggtcagccggtcagctgccgcagatcgatcgagtcggccatcgcctgcagccccg
tgtcgccggggtgcagatggtcgccgctgtcgtaggcgggcaggatccgctgcggccgca
gcggatcccgcaccgccgcgtcgaagtccagcaccccgtcgaactccccgccgctgtccc
tga
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