Streptomyces bingchenggensis: SBI_03286
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Entry
SBI_03286 CDS
T01678
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sbh
Streptomyces bingchenggensis
Brite
KEGG Orthology (KO) [BR:
sbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbh03032
]
SBI_03286
03400 DNA repair and recombination proteins [BR:
sbh03400
]
SBI_03286
Enzymes [BR:
sbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SBI_03286
DNA replication proteins [BR:
sbh03032
]
Prokaryotic type
DNA Topoisomerases
SBI_03286
DNA repair and recombination proteins [BR:
sbh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SBI_03286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FliT
ZT_dimer
DarA_N
Motif
Other DBs
NCBI-ProteinID:
ADI06407
UniProt:
D7C8L8
LinkDB
All DBs
Position
4270812..4273265
Genome browser
AA seq
817 aa
AA seq
DB search
MARRSTKTPPPDDFEERILDIDVVDEMQGSFLEYAYSVIYSRALPDARDGLKPVHRRILY
QMNEMGLRPERGFVKCARVVGEVMGKLHPHGDASIYDALVRMAQPFSMRVPLVDGHGNFG
SLGNDDPPAAMRYTECRMASATSLMTESIDEDTVDFAPNYDGSEQEPLALPAAYPNLLVN
GASGIAVGMATNMAPHNLGEVIAAARHLIRHPGADLDALMRFVPGPDLPTGGRIVGLGGV
RDAYEKGRGTFKIRATVSVEDVTQRRKGLVVTELPFTVGPEKVISKIKDLVGSKKLQGIS
DVKDLTDRQHGLRLVIEIKNGFNPEAVLEQLYKLTPMEESFGINNVALVDGQPLTLGLKE
LLEVYLDHRFDVVRRRSEFRRTKRRDRLHLVEGLLVALLDIDEVIRVIRSSENAAEAKQS
LIARFELSDVQTQYILDTPLRRLTKFDRIELESERDRLKAEIEELTRILDSDAELRKLVS
AELAQVAKKFGTERRTVLLESADAPVTAVPLEVADDPCRVLLSSTGLLARTANGEPFPGE
EQAKRAKHDVIVSAVPATARGDLGAVTSTGRLLRLAVVDLPILPETAWAPNLAGGAPIAE
FLSLEDGEELICLTTLDESSPGLAIGTEQGVVKRVVPDYPANKDELEVIGLKEGDRIVGA
VELRTGEEDLVFITDDAQLLRYPASQVRPQGRPAGGMAGIKLGAGAKVISFTAVDPAVDA
VVFTIAGSHGTLDDSVQQSAKLTPFDQYPRKGRATGGVRCQRFLKGEDCLVLAWAGATPA
RAATSTGTPVPLPEPDPRRDGSGEALAKPVAVVAGPV
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgcagcacaaaaacccctccgccggacgatttcgaggagcgcattctcgac
atcgacgtcgtcgacgagatgcagggctccttcctcgagtacgcgtactcagtcatctac
tcgcgcgccctgcccgacgcccgggacgggctcaagccggtgcaccggcgcatcctctac
cagatgaacgagatgggcctgcggcccgagcgcggcttcgtcaagtgcgcccgggtcgtc
ggcgaggtcatgggcaagctgcacccccatggcgacgcgtcgatctatgacgcgctggtg
cgtatggcccagcccttctcgatgcgggtgccgctggtcgacggccacggcaacttcggc
tccctgggcaatgacgacccgcccgcggcgatgcgatacaccgagtgccggatggcctcg
gcgacctcgctgatgaccgagtcgatcgacgaggacaccgtcgacttcgcgccgaactac
gacggcagcgagcaggagccgctggcgctgcccgccgcctatcccaacctgctggtcaac
ggggcgtccgggatcgcggtcggcatggcgaccaacatggccccgcacaacctgggcgag
gtgatcgccgccgcccgccatctgatcaggcacccgggcgcggacctggacgctctgatg
cggttcgtgccgggccccgacctgccgaccggcggccggatcgtgggcctgggcggcgtc
cgggacgcgtacgagaaggggcgcggcaccttcaagatccgcgccacggtctcggtggag
gacgtgacgcagcgccgcaagggcctggtcgtcaccgaactgccgttcacggtcggcccc
gagaaggtcatctcgaagatcaaggacctggtcggctcgaagaagctgcagggcatctcg
gacgtcaaggacctcaccgaccgccagcacggcctgcgcctggtcatcgagatcaagaac
ggcttcaacccggaggccgtgctggagcagctctacaagctgacgccgatggaggagtcc
ttcggcatcaacaatgtcgcgctggtcgacggccagccgctcacactcgggctcaaggag
ctgctggaggtctatctcgaccaccgcttcgatgtggtgcggcggcgcagcgagttccgg
cgcaccaagcggcgggaccggctgcacctggtcgagggtctgctggtcgccctcctcgac
atcgacgaggtcatccgcgtcatccgctccagcgagaacgcggcggaggcgaagcagtcc
ctgatcgcccgcttcgagctctccgatgtccagacgcagtacatcctggacaccccgctg
cgccggctgaccaagttcgaccggatcgagctggagtcggagcgcgaccgcctcaaggcg
gagatcgaggagctgacccggatcctggattcggacgccgagctgcgcaagctggtgtcg
gcggaactggcccaggtggccaagaagttcggcacggagcggcgcacggtgctgctggag
tcggcggacgccccggtgaccgcggtgccgctggaggtcgccgacgacccgtgccgggtg
ctgctgtcctccaccggcctgctggcccgcacggccaacggtgagccgttcccgggcgag
gagcaggccaagcgcgccaagcacgatgtgatcgtctcggcggtcccggccacggcccgc
ggggacctgggggcggtgacctcgaccgggcggctgctgcggctcgccgtggtcgatctg
ccgatactcccggagacggcttgggcgccgaacctggcgggcggggctccgatcgcggag
ttcctgtcgctggaggacggcgaggagctgatctgcctcaccacgctcgacgagtcctca
ccagggctcgcgatcggcacggagcagggcgtcgtcaagcgcgtggtccccgactatccc
gccaacaaggacgagttggaggtcatcggcctcaaggagggcgaccggatcgtcggcgcg
gtggagctgcgtacgggcgaggaggacctggtcttcatcaccgacgacgcgcagttgctg
cgctatccggcgagccaggtacgaccacagggccgcccggcgggtggcatggccggtatc
aagctgggcgcgggagcgaaggtgatctcgttcacggccgtcgacccggcggtcgacgcg
gtggtgttcacgatcgccggctcgcacggcaccctcgacgactcggtgcagcagtcggcc
aagctcactccgttcgaccagtacccgcgcaagggccgggccaccggcggggtgcgctgc
cagcggttcctgaagggcgaggactgcctggtcctggcctgggcgggcgcgacaccggcc
cgcgcggccacctcgaccggcacccctgtgccgctgccggagcccgacccgcgccgcgac
ggctcgggggaggcgctcgccaagccggtggccgtggtcgccgggccggtgtag
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integrated database retrieval system
