Streptomyces bingchenggensis: SBI_03454
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Entry
SBI_03454 CDS
T01678
Symbol
whiG
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
sbh
Streptomyces bingchenggensis
Pathway
sbh02020
Two-component system
sbh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sbh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SBI_03454 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SBI_03454 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbh03021
]
SBI_03454 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sbh02035
]
SBI_03454 (whiG)
Transcription machinery [BR:
sbh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SBI_03454 (whiG)
Bacterial motility proteins [BR:
sbh02035
]
Flagellar system
Flagellar assembly proteins
Stator
SBI_03454 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
Sigma70_ECF
HTH_31
CENP-B_N
HTH_37
UPF0122
GerE
Motif
Other DBs
NCBI-ProteinID:
ADI06575
UniProt:
D7CC56
LinkDB
All DBs
Position
complement(4496808..4497641)
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AA seq
277 aa
AA seq
DB search
MPQHISGSDRAAPTPARGAVRPAAPSSLDELWRSYKSTGDGRLREQLILHYSPLVKYVAG
RVSVGLPSNVEQADFVSSGVFGLIDAIEKFDPERAIKFETYAITRIRGAMIDELRALDWI
PRSVRQKARAVERAYATLEAALRRTPSEAEVAAEMDIGLDELHGVFSQLSLANVVALEDL
LHASGEGGERLSLMDTLEDTAADNPVEVAEDRELRRLLARAINTLPEREKTVVTLYYYEG
LTLAEIGQVLGVTESRVSQIHTKSVLQLRAKLADVGR
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacatctccgggtctgaccgcgcggcgccgacccctgcccgcggcgcggtg
cgtcccgccgccccgtcatcgctcgacgagctgtggcggtcctacaagtccacgggcgac
ggtcggctccgggagcagctgatcctccactactcgccgctggtgaagtatgtggcgggg
cgggtcagcgtcgggctgccgtccaatgtcgagcaggccgacttcgtctcctcgggcgtc
ttcggactcatcgacgccatcgagaagttcgaccccgagcgggccatcaagttcgagacc
tacgcgatcacccggatccgtggcgcgatgatcgacgagctgcgggcgctggactggatc
ccgcgctcggtccgccagaaggccagagcggtcgagcgggcctacgccacactggaggcg
gccctgcgccgcaccccctcggaggccgaggtggccgccgagatggatatcggcctcgat
gaactgcacggggttttcagccagttgtcgctggccaatgtggtcgccctcgaagacctg
ctgcacgccagtggggagggcggcgagcggctgagcctcatggacaccctggaggacacc
gccgccgacaaccccgtggaggtggccgaggaccgcgagctgcgcaggctgctcgcccgc
gccatcaacacgctccccgagcgggagaagaccgtggtcaccctctactactacgaggga
ctgacgctggccgagatcggccaggtcctcggggtcacggagagcagggtcagccagatc
cacaccaaatccgtactgcagctgcgggccaagctggccgatgtcggacgctga
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integrated database retrieval system
