KEGG   Streptomyces bingchenggensis: SBI_03956
Entry
SBI_03956         CDS       T01678                                 
Name
(GenBank) putative sigma factor
  KO
K03090  RNA polymerase sigma-B factor
Organism
sbh  Streptomyces bingchenggensis
Brite
KEGG Orthology (KO) [BR:sbh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sbh03021]
    SBI_03956
Transcription machinery [BR:sbh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SBI_03956
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_23 DUF7343 HTH_AsnC-type HTH_24 MarR Sigma70_ECF MarR_2 GerE HTH_3 IF2_N HTH_Crp_2 HTH_5 NirdL-like_HTH HTH_AraC
Other DBs
NCBI-ProteinID: ADI07077
UniProt: D7CHM0
LinkDB
Position
5052671..5053399
AA seq 242 aa
MFVELRSLPEGSTARAELRNTLVRMHLPLVEHLARRFRNRGEPLDDLTQVATIGLIKSVD
RFDPDRGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQELRLSLTTATAELSQRHGRA
PTVHELAEQLSISEEEVLEGLESANAYSTLSLDVPDTDDESPAVADTLGAEDEALEGVEY
RESLKPLLEDLPPREKKILLLRFFGNMTQSQIAQEVGISQMHVSRLLARTLAQLRERLLV
EE
NT seq 729 nt   +upstreamnt  +downstreamnt
atgttcgtcgagctgcgcagccttccggagggctccacggcccgcgccgagctgcgcaac
accctcgtgcggatgcatctgccgctggtggagcacctggcgcggcgcttccgcaaccgc
ggcgagccgctggacgacctcacccaggtcgccaccatcggattgatcaagtccgtggac
cggttcgacccggaccgcggtgtggagttctcgacgtatgcgacccccacggtcgtcggc
gagatcaagcggcacttccgcgacaagggctgggcggtgcgggtgccgcgtcggctgcag
gagctgcggctctcgctgaccacggccaccgcagagctctcccagcggcacggccgcgcc
cccacggtccatgagctggccgagcagctgagcatctccgaggaggaggtgctggagggc
ctggaatcggccaacgcgtacagcacgctgtccctggacgtgcccgacacggacgacgag
tccccggcggtcgcggacacgctcggcgcggaggacgaggcgctggagggcgtcgagtac
cgcgagtcgctgaagccgctgctggaggatctgccgccacgcgagaagaagatcctgctg
ctgcgcttcttcggcaatatgacccagtcgcagatcgcgcaggaggtcggcatctcgcag
atgcatgtctcgcgactgctggcccgtaccctcgcgcagctgcgggagcggttgctcgta
gaggagtga

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