Streptomyces bingchenggensis: SBI_04038
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Entry
SBI_04038 CDS
T01678
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sbh
Streptomyces bingchenggensis
Pathway
sbh03420
Nucleotide excision repair
sbh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SBI_04038
03430 Mismatch repair
SBI_04038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbh03400
]
SBI_04038
Enzymes [BR:
sbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SBI_04038
DNA repair and recombination proteins [BR:
sbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SBI_04038
MMR (mismatch excision repair)
Other MMR factors
SBI_04038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
DUF6011
Zn_Ribbon_TF
Zn_ribbon_TiaS
Babuvirus_MP
Motif
Other DBs
NCBI-ProteinID:
ADI07159
UniProt:
D7BQD0
LinkDB
All DBs
Position
complement(5134958..5137249)
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AA seq
763 aa
AA seq
DB search
MTAATPSPLFPRVSTPAEYATVPRDADAVLEGLDPEQREVATALYGPVCVLAGAGTGKTR
AITHRIAYGVRAGVFQPASVLAVTFTNRAAGEMRGRLRQLGAGGVQARTFHSAALRQLQY
FWPKAVGGEVPRLLERKVQLVAEAAARCRVRLDRNELRDVTGEIEWSKVTQTVPEDYPAV
AAKSGREAPRDAAEIARIYGMYEQLKRERGVIDFEDVLLLTVGVLQERHDIADQVRRQYQ
HFVVDEYQDVSPLQQRLLELWLGDRESLCVVGDASQTIYSFTGATPDHLLNFRTRHPGAT
VVKLVRDYRSTPQVVHLANGVLAQARGRAADHRLELVSQREPGPDPVYTAYADEPAEAEG
VARRIRELITPVEQGGGGVPASEVAILYRVNAQSEVYEQALADAQVPYQLRGAERFFERP
EVREAGLLLRGAARAGNADPALTDADIPSQVRAVLGTRGWTPEPPAGSGAVRDRWESLAA
LVRLAEQFCASQLAAGRQVTLADLVAELDERAAAQHAPTVEGVTLASLHAAKGLEWDAVF
LVGLTEGMVPITYAKTDPQVEEERRLLYVGVTRARRHLALSWALSRSPGGRANRRPSRFL
NGLRPGSAAPAPRMPGGAGGIERGSGGAIAPVRKRRGPVHCRVCGRTLTDAGEMKLRRCE
DCPSELDEALYERLRDWRAEQAGQLGQPAYCVFTDKTLLAIAEAVPGTEGELSGIPGVGR
RKLDKFGADVLALCSGRELTRAEGIDGTSGSGSEEPARNSTEK
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcagcaacgccctcccctctcttcccgcgggtctccacgccggccgagtacgcg
acggttccgcgcgacgccgacgcggtgctcgaagggctcgacccggagcagcgcgaggtg
gccacggccctgtacgggccggtgtgtgtgctggccggggccgggacgggcaagacccgt
gccatcacccaccggatcgcctatggggtgcgggcgggcgtcttccagcccgcgagtgtg
ctcgccgtcaccttcaccaaccgcgcggcgggggagatgcgcgggcggctgcggcagctg
ggcgcgggcggggtgcaggcgcgcaccttccactcggccgcgctccgccagctgcagtat
ttctggcccaaggcggtgggcggcgaggtgccgcggctgctcgagcgcaaggtgcagctg
gtcgcggaggccgcggcgcgctgccgggtccggctggaccgcaatgagctgcgggatgtg
acgggggagatcgagtggtcgaaggtcacccagaccgtgcccgaggactatccggccgtg
gccgccaagtccggccgggaggccccgcgtgacgccgccgagatcgcccggatctacggc
atgtacgagcagctcaagcgcgagcgcggggtgatcgacttcgaggatgtgctgctgctg
acggttggggtgctccaggagcggcatgacatcgccgaccaggtgcgccgtcagtaccag
cacttcgtggtcgacgagtaccaggacgtcagcccgctgcagcagcggctgctcgagctg
tggctcggcgaccgggagagcctgtgcgtggtcggcgacgccagccagaccatttactcc
ttcaccggcgccacccccgaccatctgttgaacttccgcacccggcacccgggtgcgacg
gtcgtcaagctggtccgcgactaccgctccaccccccaggtcgtccacttggccaacggg
gtgctggcccaggcccgcggccgggcggcggaccaccgactggagctggtctcacagcgc
gagccgggacccgacccggtctatacggcatacgcggacgagccggccgaggccgagggg
gtggcccgccggatccgtgagctgatcacccccgtggagcagggcggcggcggggtcccg
gcgagcgaggtcgcgatcctctaccgggtcaatgcgcagtcggaggtctatgagcaggcg
ctggccgacgcccaggtgccttatcagctgcgcggcgccgagcggttcttcgagcgacct
gaggtgcgcgaggcggggctgctgctgcgcggcgcggcccgcgcgggaaacgcggacccc
gcgctgacggacgcggatatcccctcccaggtgcgggcggtgctcggtacccgcggctgg
acgccggagcccccggccggatcgggcgcggtccgtgaccgctgggagtccctggcggcg
ctggtgcggctcgccgagcagttctgcgcgagccagttggcggcgggccggcaggtcacg
ctggccgatctggtggcggagctcgacgagcgggcggcggcccagcacgccccgaccgtc
gaaggtgtgacgctcgcctcactgcacgccgccaagggcctggagtgggacgcggtcttt
ctggtcgggctcaccgagggcatggtgcccatcacctatgccaagaccgacccgcaggtg
gaggaggagcgtcggctgctctatgtgggggtcacccgtgcccgccgccatctggccctc
tcctgggcgctctcgcgctctcccggaggccgtgcaaaccgccgccccagccgctttctg
aacgggctgcgtcccggctccgcggcccccgccccccgcatgccgggcggggccggcggc
atcgagcgcggcagtggcggagcaatcgccccggtccgcaagcggcgcggcccggtgcac
tgccgggtgtgcggcaggacgctgacggacgcgggcgagatgaagctgaggcgctgtgag
gactgcccctcggagctggacgaggcgctgtacgagcggctgcgggactggcgggccgag
caggccgggcagctgggccagcccgcctactgcgtcttcaccgacaagaccctgctggcg
attgccgaggccgtaccgggaaccgaaggggagctgtcgggcatccctggagtggggagg
cggaagctcgacaagttcggcgccgacgtcctcgcgctctgctccgggcgggaactcacc
cgggcggaggggatcgacgggaccagcggaagcggttccgaagaacccgcgcgaaactcg
acggaaaaatag
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integrated database retrieval system
