Streptomyces bingchenggensis: SBI_04631
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Entry
SBI_04631 CDS
T01678
Name
(GenBank) putative WD-40 repeat protein
Organism
sbh
Streptomyces bingchenggensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_Gbeta
Beta-prop_EML_2
WD40_Prp19
nSTAND1
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_IFT122_1st
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_VPS8
Tricorn_2nd
RMC1_N
Ge1_WD40
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Tricorn_N
Beta-prop_ACSF4
Beta-prop_TEP1_C
Beta-prop_NWD2_C
WDR54
eIF2A
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_2nd
Cytochrom_D1
Beta-prop_SPT8
Nbas_N
DUF7165
PROPPIN
Beta-prop_NUP159_NUP214
Beta-prop_DCAF12
Beta-prop_NOL10_N
HTH_31
Beta-prop_pof12
AAA_29
AAA_16
PAP_PilO
AAA_21
ABC_tran
nSTAND6
RsgA_GTPase
SMC_N
AAA_22
HTH_3
Motif
Other DBs
NCBI-ProteinID:
ADI07751
UniProt:
D7BXH8
LinkDB
All DBs
Position
complement(5776494..5780378)
Genome browser
AA seq
1294 aa
AA seq
DB search
MQRFAFELRKLRQEAGAPTYRAMAVNTGYGVTTLSRAAAGEQLPTLPVVLAYVKACGGDS
EEWEERWRRAAADEAAEPRADDDAEPPYRGLARFEPDDAALFFGRDQLIDDLLRLTAHHR
ITAVVGASGSGKSSLLRAGLIPRLRTTEGPDMRPAALRVITPGAHPLRDHEQRLVPKEGG
EGDTWLVVDQMEELYTLCTDPAERTAFIDRLLTAAAPESRLRVLIAVRADFFGHLAGHRP
LADALREATLLVPPMNRGELREAVVKPAQAAGLIVERTLTAHILDEVDGEPGALPLMSHA
LLETWPRRKGRALTLTAYEAAGGVHGAIAQTAEDLYTHLTPDQASCARRILLRLITPGDG
AQDTRRPAPREELETDTSPATAEVLERLVKARLVILDGHTVHLAHEALIAAWPRLRKWID
EDRDRLRLHRQLTDAAHAWQALGRAPGALYRGTRLATAEETFPIAGSGSDLTPLESDFLT
SSSTVRHREEAAAARTTRRLRQFATTVSVLLVLALTAGLIAWQQYRTSEQQRHQALTAQR
IALSRQLAAQSAGLMDSNPDLASLLAVEAYRTSPTKEASADLFAAAALPLNRRLTGHTDA
VGSVKFSPDGRTLASIGEGGKVRLWDVATGRRRTIVTGHSDDVADSVAFSPDGRTLATGG
ADTKVHLWNVVTGKLRATLTGHSDFVRSVAFSPDGRTVASGSDDKTVRLGNVATGELRTT
LTGHNFVDSVAFSPDGRTLAGGGEGKIRLWEVATGELRATLTGHSDFVGSVAFSPDGRTL
AGGGERKIRLWDVATGKQRITLTGHTEPVDSVAFSPDGRTLASGSQDTTVRLWNVATGEL
RTTLTGHSDFVNSVAFSPDGRTLASGSSDKTVRLWKVAISRLRTTLTGHTEPVDSVAFSP
DGRTLASGSNDKTVRLWNVATGKPRTALTGHAEVQGSVAFSPDGHTLASGGEGKIQLWNV
TTGKLRTTLTGHYDGAISVAFSPDGRTLASGSNDEHVRLGDVATGEVRTTLTGHYDGAIS
VALSRDARTLASGGAEGKIWLWDVATGEPRTTLTGHTDAVGSVAFSPDGRTLASGSEDTT
VRLWDVATGKLRTTRTGQTDMVSSEAFSPDGRTLASGGNDKHVRLWDVATGKLRTTLTGQ
TDMVSSVAFSPDGRTLASGGNDKHVRLWDVATGKLRTTLTGHTDAVWSVAFSPDGRTLAS
GGAEGKIWLWDVATGELRATLTGHTNAVGSVAFSPDGRTLASGSDDRTVRLWDGDLPDPA
SSIRKICQAVHRSFTSSERSVYLADQPSDPVCRS
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
gtgcagaggttcgcattcgagttacgcaaactgcgccaggaggcgggcgcgcccacctac
cgggcgatggcagtgaacacgggttacggcgtgaccacgttgtcccgggcggcggcaggg
gagcaactgccgaccctcccggtggtgctggcgtacgtgaaggcttgcggcggcgactcc
gaggagtgggaggaacgctggcggcgggctgcggcggatgaagccgccgagccgcgtgcc
gacgacgatgccgagcctccgtaccggggtctggcccgcttcgagcccgatgacgcggcc
ttgttcttcggccgcgaccagctcatcgatgacctgctgcgcctgaccgcccaccatcgg
atcacggcggtggtcggcgcctccggcagcggaaagtcctccctgctgcgcgccggtctc
atcccgcggctgcgtaccaccgaaggccccgacatgcgcccggccgccctgcgggtcatc
acccctggtgcccatcccctgcgcgaccatgagcagcggctggtgccgaaggagggcgga
gagggggacacgtggctggtcgtggaccagatggaggagctctacaccctctgcaccgac
ccggcggaacgcaccgcgttcatcgaccgcctcctgaccgccgccgcccccgagagtcgt
ctgcgggtgctgatcgccgtacgggccgacttcttcgggcacctggccggccaccgacct
ctcgccgacgcactgcgcgaggccacccttctggtcccgccgatgaatcgcggggaactc
cgcgaggctgtcgtcaaacccgcccaggccgcgggcctcattgtcgaacgcaccctgacc
gcccacatcctcgacgaagtcgacggcgaacccggcgccctgcccctgatgtcccacgcc
ctcctggaaacctggccccgccgcaaaggccgcgccctcaccctcaccgcgtacgaagcg
gccggcggcgtgcacggcgccattgcccagacagccgaagacctgtacacccacctcacc
cccgaccaggcttcctgcgcccggcggatcctgctgcgcctgatcaccccaggagacggc
gcgcaggacacccggcggcccgcgccccgggaggaactggagaccgacacctcccccgcc
accgctgaggtgctggagcggctggtgaaggctcgattggtcatcctcgacggccacacg
gtgcacctcgcccacgaagccctgatcgctgcctggccccggctacgcaagtggatcgac
gaagaccgcgaccgcctgcggctccaccgccagctcaccgacgccgcccacgcctggcag
gccctcggccgcgcccccggcgcgctctaccgcggcacccgactcgccaccgccgaggaa
accttccccatcgctggttccggcagcgacctcaccccgctggaaagcgacttccttacc
agcagctccaccgtccgccaccgcgaggaagcagcagccgcccgcaccacccgacgcctg
cgtcagttcgccaccaccgtctcggtcctgctcgtgctcgctctcaccgccgggctgatc
gcctggcagcaataccggaccagcgaacagcaacgacaccaggcgctcaccgcccaacgg
atcgcgctctcacggcagctggcggcgcagtcggccggcctcatggactccaaccctgac
ctggcttcgctcttggcggtcgaggcataccggaccagtccgacgaaggaggccagcgcc
gaccttttcgctgctgcagctcttcccctcaatcgacgtctgaccgggcacaccgacgcc
gtgggatcggtgaagttcagtcctgacggccgcactttggccagcatcggggagggtggg
aaggtccggttgtgggacgtggcgacgggtaggcggcgcaccattgtgactggccacagc
gacgacgtcgcggattcggtggcgttcagtcctgacggccgtacgctggccaccggcggc
gccgacacaaaagtgcacttgtggaacgtcgtgacaggcaagctgcgcgctactctcact
ggccacagcgatttcgtgaggtcggtggcgttcagcccagatggccgcaccgtggccagc
ggcagcgacgacaaaaccgtccggctggggaacgtggcgaccggcgagctccgcaccacc
ctcaccggccacaactttgtggattcggtggcgttcagtcctgacggccgcactctggcc
ggcggaggggaggggaagatccggttatgggaagtggccactggcgagctgcgcgccact
ctcactggccacagcgatttcgtggggtcggtggcgttcagtccggatggccgtactctg
gccggcggtggagagaggaagatccggttgtgggatgtggcgaccggcaagcagcgcatc
accctaaccggccacactgagcccgtggattcggtggcgttcagtccggatggccgcacc
ctggccagcggcagccaggacacgacagtccggctgtggaacgtggcgaccggcgagctc
cgcaccaccctcaccggtcacagcgacttcgtgaattcggtggcgttcagccccgacggc
cggaccctggccagcggcagcagtgacaagaccgtgcggctgtggaaggtggcgatcagc
agactccgcaccactctcaccggccacactgagcccgtggattcggtggcgttcagcccc
gacggtcgcaccctggccagcggcagcaacgacaaaaccgtgcggctgtggaacgtggcg
accggcaagccgcgcaccgccctcactggccacgctgaggtccaggggtcggtggcgttc
agtccagacggccacaccctggccagcggaggggaggggaagatccagctatggaacgtg
acgaccggcaagctgcggaccaccctcaccggccactacgacggcgcgatttcggtggcg
ttcagtcctgacggccgcaccctcgccagcggcagcaacgatgaacacgtccggctgggg
gatgtggcgactggcgaggtgcggaccaccctcaccggccactacgacggcgcgatttcg
gtggcgctcagtcgggatgcccgcaccctggccagtggtggagcggaggggaagatctgg
ctgtgggatgtggcgactggcgagccgcggaccaccctcaccggccacactgacgccgtg
gggtcggtggcgttcagtccggatggccgcaccctggccagcggcagcgaggacacgaca
gtcaggctgtgggacgtggcgaccggcaagctgcgcaccacccgcaccgggcaaaccgac
atggtgagttcggaggcgttcagccccgacggtcgtacgctggccagcggcggcaatgac
aaacacgtccggctgtgggatgtggcgaccggcaagctgcgcaccaccctcaccgggcaa
accgacatggtgagttcggtggcgttcagccccgacggtcgtacgctggccagcggcggc
aatgacaaacacgtccggctgtgggatgtggcgaccggcaagctgcgcaccaccctcact
ggccacactgacgccgtgtggtcggtggcgttcagtccggatggccgcaccctggccagt
ggtggagcggaggggaagatctggctgtgggatgtggcgactggcgagctgcgcgccacc
ctgaccggacacaccaacgccgtggggtcggtggcgttcagccccgatggccgcactctg
gccagcggcagcgacgaccgaacagtccggctatgggatggtgaccttcctgacccggct
tcttccatcaggaagatttgccaagcagtccacaggtccttcacctcaagcgaacggtcc
gtgtacctcgcggatcaaccctctgacccagtgtgccgatcatga
DBGET
integrated database retrieval system