Streptomyces bingchenggensis: SBI_04946
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Entry
SBI_04946 CDS
T01678
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sbh
Streptomyces bingchenggensis
Pathway
sbh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SBI_04946 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbh03019
]
SBI_04946 (groEL)
03110 Chaperones and folding catalysts [BR:
sbh03110
]
SBI_04946 (groEL)
03029 Mitochondrial biogenesis [BR:
sbh03029
]
SBI_04946 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbh04147
]
SBI_04946 (groEL)
Enzymes [BR:
sbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SBI_04946 (groEL)
Messenger RNA biogenesis [BR:
sbh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SBI_04946 (groEL)
Chaperones and folding catalysts [BR:
sbh03110
]
Heat shock proteins
HSP60 / Chaperonin
SBI_04946 (groEL)
Mitochondrial biogenesis [BR:
sbh03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SBI_04946 (groEL)
Exosome [BR:
sbh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SBI_04946 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
SBI_04946 (groEL)
Exosomal proteins of breast cancer cells
SBI_04946 (groEL)
Exosomal proteins of colorectal cancer cells
SBI_04946 (groEL)
Exosomal proteins of bladder cancer cells
SBI_04946 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4844
CbiA
Motif
Other DBs
NCBI-ProteinID:
ADI08066
UniProt:
D7C304
LinkDB
All DBs
Position
complement(6125654..6127279)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKIIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGANPMALKRGIE
KAVEAVSAQLLEQAKDVETKEQIASTASISAADTQIGELIAEAMDKVGKEGVITVEESQT
FGLELELTEGMRFDKGYISPYFATDMERMEASLDDPYILIVNSKITSVKDLLPLLEKVMQ
SGKPLLIIAEDIEGEALATLVVNKIRGTFKSVAVKAPGFGDRRKAMLGDIAILTGGTVIS
EEVGLKLENAGVDLLGRARKVTVTKDETTIVDGAGDTDQVQGRVNQIRAEIESSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQT
VSVFDKLELDGDEATGAQAVRLALEAPLKQIAVNAGLEGGVVVEKVRNLTPGHGLNAATG
EYVDLIAEGIIDPAKVTRSALQNAASIAALFLTTEAVIADKPEKAAAAGAPGGMPGGDMD
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcgcgttcgacgaggaggcgcggcgcggcctcgagcgcgggatgaac
cagctcgccgacgccgtcaaggtcaccctcggccccaagggccgcaacgtcgtcctcgag
aagaagtggggcgcccccacgatcaccaacgatggtgtgtccatcgccaaggagatcgag
ctcgaggacccgtacgagaagatcggcgccgagctggtcaaggaggtcgcgaagaagacg
gacgacgtcgccggtgacggcacgacgaccgcgaccgtcctcgcccaggcgctggtcaag
gagggcctgcggaacgttgccgcgggcgccaacccgatggccctcaagcgcggcatcgag
aaggccgtcgaggccgtctccgcccagctgctcgagcaggccaaggacgtggagaccaag
gagcagatcgcctccaccgcctccatctccgccgccgacacccagatcggcgagctcatc
gccgaggcgatggacaaggtcggcaaggaaggcgtcatcaccgtcgaggagtcgcagacc
ttcgggctcgagctcgagctcaccgagggcatgcgcttcgacaagggctacatctccccg
tacttcgccaccgacatggagcgtatggaggcgtcgctcgacgacccgtacatcctgatc
gtcaactcgaagatcaccagcgtgaaggacctcctcccgctgctggagaaggtcatgcag
tcgggcaagccgctgctgatcatcgccgaggacatcgagggcgaggccctggcgaccctg
gtcgtcaacaagatccgtggcaccttcaagtccgtcgccgtcaaggccccgggcttcggt
gaccgccgcaaggccatgctcggcgacatcgccatcctcaccggtggcaccgtcatctcc
gaggaggtcggcctcaagctggagaacgcgggcgtcgacctgctcggccgtgcccgcaag
gtgaccgtcaccaaggacgagaccaccatcgtggacggcgccggcgacacggaccaggtg
cagggccgcgtcaaccagatccgcgccgagatcgagtcctcggactcggactacgaccgc
gagaagctgcaggagcgcctggcgaagctggccggcggcgtggccgtcatcaaggccggt
gccgccaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgcggtgcgcaac
gccaaggccgccgtcgaggagggcatcgtcgccggtggtggcgtggccctgctgcagacc
gtctcggtcttcgacaagctggagctggacggcgacgaggccaccggcgcccaggccgtg
cgcctggcgctcgaggccccgctcaagcagatcgcggtcaacgccggcctcgagggcggc
gtcgtggtggagaaggtgcgcaacctgaccccgggccacggcctgaacgccgcgaccggc
gagtacgtcgacctgatcgccgagggcatcatcgacccggccaaggtcacgcgctccgcg
ctgcagaacgccgcgtcgatcgccgcgctgttcctgaccaccgaggccgtcatcgccgac
aagccggagaaggccgccgcggcgggcgctccgggcggcatgccgggcggtgacatggac
ttctga
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