Streptomyces bingchenggensis: SBI_05386
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Entry
SBI_05386 CDS
T01678
Symbol
recF
Name
(GenBank) recombination protein F
KO
K03629
DNA replication and repair protein RecF
Organism
sbh
Streptomyces bingchenggensis
Pathway
sbh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SBI_05386 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbh03400
]
SBI_05386 (recF)
DNA repair and recombination proteins [BR:
sbh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SBI_05386 (recF)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
AAA_33
AAA
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
ADI08506
UniProt:
D7C8V5
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Position
6607089..6608312
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AA seq
407 aa
AA seq
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MHVTHLSLADFRSYARAEVALGPGVTAFVGPNGQGKTNLVEAVGYVATLGSHRVSADAPL
VRMGADRAVVRAAIVEGDRQQLVELELNPGKANRARINRSSQVRPRDVLGILRTVLFAPE
DLALVKGDPGERRRFLDELITARSPRMAGVRADYERVLKQRNTLLKTAALARRHGGGRGS
GGDGALSTLDVWDQHLARAGAELLAQRLDLIAALQPLTDKAYEQLAPGGGPIGFDYRSSV
GDGLAAAGTREELYEQLSAALTAARKQEIERGVTLVGPHRDDLILRLGELPAKGYASHGE
SWSYALALRLASYDLLRADISWAPGGLSAEAAEAAGGGEAGAVRRAGEPVLVLDDVFAEL
DERRRERLAELVAPGEQVLVTAAVEDDVPGVLAGARYAVSEGEVRPL
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtaacgcatctgtcgctcgccgacttccgctcatacgcccgggccgaggtcgct
ctcggtccgggcgtcacggcttttgtgggccccaacggccaggggaagaccaacctcgtc
gaggccgtcggctatgtggccacgctcggcagccatcgcgtctccgccgacgccccgctg
gtgcggatgggcgcggaccgggcggtcgtgcgggccgcgatcgtcgagggcgaccgacag
caactggtcgagctggagctgaaccccggtaaggccaaccgcgccagaatcaatagatcc
tcgcaggtcagaccgcgcgacgtgctcggcatcctgcgcacggtcctgttcgcgcccgag
gacctggccctggtcaagggcgatcctggggagcgccggcgctttctggacgagctgatc
accgcgcgctcaccgcgcatggccggggtccgcgccgactacgagcgggtgctcaagcag
cgcaacaccctgctcaagaccgccgcgctggcccggcgccacggcggcggccgcggttcc
gggggcgacggggcgctgtccactctggacgtatgggaccagcatctggcgcgcgccggt
gcggaattgctcgcccagcgcctcgatctgatcgccgcgctgcagccgctgaccgacaag
gcgtatgaacaactggcgccgggcggcggcccgatcggtttcgactaccgcagctccgtg
ggcgacggcctggcggccgcgggcacccgcgaggagctgtacgagcagctttcggccgcg
ctcaccgccgcccgtaagcaggagatagagcgcggggtgacgctggtcggcccgcaccgc
gacgatctgatcctgcggctcggggagcttccggcgaagggctatgcgagccatggcgag
tcctggtcgtatgcgctggccctgcgcctggcctcgtacgacctgctgcgcgcggacatc
tcatgggcgccgggcgggctttccgccgaggcagccgaggccgccgggggcggcgaggcc
ggggcggtccggcgggcgggcgagcccgtgctggtcctggacgacgtcttcgcggagctc
gacgagcggcgccgggagcggctggccgaactggtcgcgcccggcgagcaggtgctggtg
acggcggccgtggaggacgacgtccccggtgtgctggcgggcgcccgctatgcggtgtcc
gagggggaggtgcggcccctgtga
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