Streptomyces bingchenggensis: SBI_05388
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Entry
SBI_05388 CDS
T01678
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sbh
Streptomyces bingchenggensis
Brite
KEGG Orthology (KO) [BR:
sbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbh03032
]
SBI_05388 (gyrB)
03400 DNA repair and recombination proteins [BR:
sbh03400
]
SBI_05388 (gyrB)
Enzymes [BR:
sbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SBI_05388 (gyrB)
DNA replication proteins [BR:
sbh03032
]
Prokaryotic type
DNA Topoisomerases
SBI_05388 (gyrB)
DNA repair and recombination proteins [BR:
sbh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SBI_05388 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GlutR_dimer
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ADI08508
UniProt:
D7C8V7
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All DBs
Position
6609178..6611220
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AA seq
680 aa
AA seq
DB search
MLCQKGRFVADSGNPNENIPSEIPSEDVDGALAPPSYDASAITVLEGLDAVRKRPGMYIG
STGERGLHHLVQEVVDNSVDEALAGHADTIEVTILPDGGVRVVDNGRGIPVDLHPVEKKP
AVEVVLTVLHAGGKFGGGGYAVSGGLHGVGVSVVNALSTKVSVEVKRDGYRWTQDYKLGV
PTAPLAKNEQVTETGTTVTFWADPDVFETTEYSFETLSRRFQEMAFLNKGLSISLTDERA
AHVDEEGKPLSVTYCYEGGIVDFVQYLNSRKGELVHPTIIGFEAEDKERMLSVEIAMQWN
TQYTEGVYSFANTIHTHEGGTHEEGFRAALTYLINKYARDKKLLREKDDNLTGEDIREGL
TAIISVKLGEPQFEGQTKTKLGNTEAKTFVQKIVHEHLADWLDRNPNEAADIIRKSIQAA
TARVAARKARDLTRRKGLLETASLPGKLADCQSNDPAKCEIFIVEGDSAGGSAKAGRNPQ
YQAILPIRGKILNVEKARVDKILQNNEVQALISAFGTGVHEDFDISKLRYHKIILMADAD
VDGQHINTLLLTFLFRFMRPLVEAGHVFLSRPPLYKIKWGRDDFEYAYSDRERDALIQAG
REQGKRIKEDSVQRFKGLGEMNAEELRVTTMDVDHRVLGQVTLDDAAQADDLFSVLMGED
VEARRSFIQRNAKDVRFLDI
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
gtgctgtgccagaaagggcgcttcgtggccgattccggcaaccccaacgagaacatcccg
tccgagatcccgtccgaggacgtcgacggggctctggccccgccgtcctatgacgccagt
gcgatcaccgtcctggagggcctggacgcggtccgcaagcgacccggtatgtacatcggt
tccaccggtgagcgcggcctccaccaccttgtccaagaggtggtggacaactccgtggac
gaggccctggccggtcacgcggacaccatcgaggtgacgatcctgcccgatggcggggtc
cgcgtggtcgacaacggccgcggtatcccggtcgacctgcatccggtggagaagaagccg
gccgtcgaggtcgtgctgaccgtgctgcacgcgggcggcaagttcggcggcggaggctac
gccgtctccggcggtctgcacggcgtcggcgtctccgtggtcaacgcgctgtcgacgaag
gtctcggtcgaggtcaagcgggacggctaccgctggacccaggactacaagctgggtgtg
cccaccgcgccgctggccaagaacgagcaggtcacggagaccggtacgacggtcaccttc
tgggccgacccggatgtcttcgagacgaccgagtactccttcgagacgctgtcgcggcgc
ttccaggagatggcgttcctcaacaaggggctgtccatctcgctgacggacgagcgcgcg
gcccatgtggacgaggagggcaagccgctctccgtgacgtactgctacgagggcggcatc
gtcgacttcgtgcagtacctgaactcccgcaagggggagctggtccaccccacgatcatc
ggattcgaggccgaggacaaggagcggatgctctcggtcgagatcgcgatgcagtggaac
acccagtacaccgagggtgtctacagcttcgcgaacaccatccacacccatgagggcggc
acccacgaggagggcttccgcgccgcgctgacgtacttgatcaacaagtacgcgcgggac
aagaagctgctccgggaaaaggatgacaatctcactggtgaggacatccgtgagggtctg
accgcgatcatctcggtcaagctgggcgagccgcagttcgagggtcagacgaagaccaag
ctgggcaacacggaggcgaagaccttcgtccagaagatcgtccatgagcacctggccgac
tggctggaccgcaaccccaacgaggcggcggatatcatccgcaagtccatccaggcggcg
acggcccgggtggcggcccgtaaggcccgcgatctgacccgccgcaaggggctgctggag
accgcgtcgctgccgggcaagctggccgactgccagtccaacgaccccgccaagtgcgag
atcttcatcgtcgagggtgactccgccggcggttcggccaaggccggccgcaacccgcag
taccaggcgatcctgcccatccgaggcaagatcctcaacgtcgagaaggcacgggtcgac
aagatcctccagaacaacgaggtccaggcgctgatctcggcgttcggcaccggtgtgcac
gaggacttcgacatcagcaagctccgctatcacaagatcatcctgatggcggacgccgac
gtcgacggccagcacatcaacaccctgctgctcaccttcctcttccgctttatgcgcccg
ctggtcgaggcgggccatgtcttcctgtcccgcccgccgctctacaagatcaagtggggc
cgggacgacttcgagtacgcgtactcggaccgtgagcgggacgcgctgatccaggccggc
cgcgagcagggcaagcgcatcaaggaggactcggtccagcgcttcaagggtctgggcgag
atgaacgccgaggagctgcgcgtgaccaccatggacgtggaccaccgcgtcctgggccag
gtcaccctggacgacgccgcgcaggccgacgatctgttctcggtcctgatgggcgaggac
gtcgaggcccggcgctcgttcatccagcgcaacgccaaggacgtccgcttcctcgacatc
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