Streptomyces bingchenggensis: SBI_05860
Help
Entry
SBI_05860 CDS
T01678
Name
(GenBank) putative DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sbh
Streptomyces bingchenggensis
Brite
KEGG Orthology (KO) [BR:
sbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbh03032
]
SBI_05860
03400 DNA repair and recombination proteins [BR:
sbh03400
]
SBI_05860
Enzymes [BR:
sbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SBI_05860
DNA replication proteins [BR:
sbh03032
]
Prokaryotic type
DNA Topoisomerases
SBI_05860
DNA repair and recombination proteins [BR:
sbh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SBI_05860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ADI08980
UniProt:
D7CG76
LinkDB
All DBs
Position
7128945..7131824
Genome browser
AA seq
959 aa
AA seq
DB search
MSPTSETAQGGRRLVIVESPAKAKTIKGYLGPGYVVEASVGHIRDLPNGAAEVPDQYTGE
VRRLGVDVEHDFQPVYVVNADKKSQVRKLKELLADSDELFLATDEDREGEAIAWHLQQVL
KPKVPVRRMVFHEITKDAIRAAVANPRELNQRLVDAQETRRILDRLYGYEVSPVLWKKVM
RGLSAGRVQSVATRLVVERERDRIAFRSAEYWDLTGVFATGRAGDTSDPGTFGARLTAVD
GRRVAQGRDFTSTGQLKGAQVLHLDEAGARGLATALADTAFTVRSVESKPYRRSPYAPFR
TTTLQQEASRKLGFGAKATMQVAQKLYENGFITYMRTDSTTLSETAVAAARAQVTQLYGA
DFLPDKPRTYAGKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFRLYELIWKRTVASQMK
DAVGNSVTVKIGGRASDGRDAEFSASGKTITFHGFMKAYVEGADDPNAELDDRERRLPQV
AEGDRLAAQEITADGHATKPPARYTEASLVKELEEREIGRPSTYASIIGTILDRGYVFKK
GTALVPSFLSFAVVNLLEKHFGRLVDYDFTAKMEDDLDRIARGEAQAVPWLKRFYFGESA
TEPGAESGAAPGAVGGAADAGNGDGDHLGGLKDLVTDLGAIDAREISSFPVGDGIVLRVG
RYGPYVERATEAEGATGQRADVPDDLPPDELTVEYAEELLAKPSGDFELGTDPATGRKIV
AKDGRYGPYVTEVLPEDTPKTGKNAVKPRTASLFKSMSPDTVTLEDALRLMSLPRVVGTD
AEGVEITAQNGRYGPYLKKGTDSRSLESEEQLFTITLDQALAIYAQPKQRGRAAAKPPLK
ELGTDPVSERPVVVKDGRFGPYVTDGETNATLRRDDDVETITPERGYELLAEKRAKGPAK
KTAKKAAAKKTTTAKTTAAKKTTTAKKTAAKKTTAAKKTAAKKTATAAKAAPKPAAKAD
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgaccagcgagaccgcacagggcggccgccgactcgtcatcgtcgagtcgcct
gccaaggcgaagacgatcaagggctatctcggcccgggctacgtcgtcgaagccagcgtc
gggcacatcagggacctgccgaacggtgcggccgaggtgcccgaccagtacaccggggag
gtccgccgcctcggtgtggatgtcgaacacgacttccagcccgtctatgtcgtcaacgct
gacaagaaaagccaggtcaggaagctcaaggaactgctcgccgactcggacgagctcttc
ctggccaccgatgaggaccgcgagggcgaggccatcgcctggcacctccagcaggtgctc
aagcccaaggtgccggtccgccggatggtcttccacgagatcaccaaggacgcgatccgc
gccgccgtcgccaatccgcgcgagctgaaccagcggctggtcgacgcccaggagacccgc
cgtatcctcgaccgcctctacggctacgaggtctcgccggtcctgtggaagaaggtcatg
cgcggcctgtccgcgggccgcgtccagtcggtggccacccgcctggtcgtcgagcgcgag
cgcgaccgtatcgccttccgctccgccgagtactgggacctgaccggcgtcttcgcgacc
ggccgggccggtgacaccagcgaccccggcaccttcggcgcccggctgaccgccgtcgac
ggccgtcgtgtcgcccagggccgcgacttcacctcgaccgggcagctcaagggcgcccag
gtcctgcacctggacgaggcgggagcccgcgggctggccacggccctcgcggacaccgcc
ttcacggtgcgttccgtcgagtccaagccgtaccgccgctcgccgtacgccccgttccgt
accaccaccctgcagcaggaggccagccgcaagctgggcttcggcgccaaggcgaccatg
caggtggcgcagaagctgtacgagaacggcttcatcacctatatgcgtacggactccacc
accctgtccgagacggcggtggcggcggcccgggcgcaggtcacccagctgtacggcgcc
gacttcctgccggacaagccgcgcacctacgcgggcaaggtcaagaacgcccaggaggcc
cacgaggccatccgcccctcgggcgaccgcttccgcaccccggcggagaccggcctcacc
ggcgaccagttccggctgtacgagctgatctggaagcggaccgtcgcctcccagatgaag
gacgcggtcggcaactccgtcaccgtcaagatcggcggccgggcgagcgacggccgtgac
gccgagttctccgcctccggtaagacgatcaccttccacggcttcatgaaggcctatgtg
gagggcgcggacgacccgaacgccgagctcgacgaccgcgagcggcgcctgccgcaggtc
gccgagggcgaccggctggccgcccaggagatcaccgccgacggccacgccaccaagccc
ccggcccgctacaccgaggcctcactggtcaaggagctcgaagagcgcgagatcggccgc
ccctcgacgtacgcctcgatcatcgggaccatcctggaccgcggctatgtgttcaagaag
ggcactgcactggtcccgtccttcctgagcttcgccgtggtcaacctgctggagaagcac
ttcggccggctggtcgactacgacttcaccgccaagatggaggacgacctcgaccgcatc
gcgcgcggcgaggcccaggccgtgccgtggctcaagcgcttctacttcggtgagagcgcc
accgagcccggcgccgagagcggcgccgcaccgggggccgtgggcggcgcggccgatgcc
ggaaacggcgacggcgaccacctcggcggcctgaaggacctggtcaccgacctcggtgcg
atcgacgcccgcgagatctcctccttccccgtgggcgacggcatcgtgctgcgggtcggc
cgctacggcccgtatgtcgagcgggcgacggaggccgagggcgcgaccggacagcgcgcc
gatgtgcccgacgacctgccgccggacgagctgaccgtcgagtacgcggaggaactgctc
gccaagccgagcggcgacttcgagctcggcaccgacccggcgaccggacgcaagatcgtc
gccaaggacggccgctacggtccgtacgtcaccgaggtgctgcccgaggacaccccgaag
accggcaagaacgcggtcaagccgcgcaccgcctcgctcttcaagtcgatgtccccggac
acggtgaccctggaggacgcgctgcggctcatgtcgctgccgcgggtggtgggcaccgat
gccgagggcgtcgagatcaccgcgcagaacggccgctacggcccgtatctgaagaagggc
accgactcgcgctcgctcgaaagcgaggagcagctcttcacgatcaccctcgaccaggcg
ctcgcgatctacgcgcagcccaagcagcgcggccgggccgcggccaagccgccgctgaag
gagctgggcaccgacccggtcagcgagcggcccgtcgtcgtcaaggacggccgcttcggc
ccgtacgtcaccgacggcgagaccaacgcgaccctgcgccgcgatgacgacgtcgagacg
atcaccccggagcgcggctacgagctgctggccgagaagcgcgccaagggcccggccaag
aagaccgccaagaaggcggcggccaagaagacgacgacggccaagacgacggcggccaag
aagacgaccaccgccaagaagaccgccgccaagaagacgaccgcggccaagaagaccgcg
gcgaagaagacggcgacggcggccaaggcggccccgaagcctgcggccaaggccgactga
DBGET
integrated database retrieval system
