Streptomyces bingchenggensis: SBI_06359
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Entry
SBI_06359 CDS
T01678
Name
(GenBank) hypothetical protein
KO
K10979
DNA end-binding protein Ku
Organism
sbh
Streptomyces bingchenggensis
Pathway
sbh03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SBI_06359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbh03400
]
SBI_06359
DNA repair and recombination proteins [BR:
sbh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
SBI_06359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
DUF5423
DUF4604
Motif
Other DBs
NCBI-ProteinID:
ADI09479
UniProt:
D7BSG1
LinkDB
All DBs
Position
complement(7681558..7682589)
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AA seq
343 aa
AA seq
DB search
MRSIWNGNISFGLVSIPIKMYPATEDHSVSFRQVHTKDGGRIRYRKVCELEDKQIDADEI
GKAYEDADGTLIPITDEDLAHLPLPTTRALEIQAFVSAADIDPLQMGDAYYLGANGPAAA
KPYALLREALKRSEKVAITKYAHRGRERLGMLRVVGDAIAMHRLLWPDEVRNPVGVAPKE
NVTVREAELDLADTLMNTLGEVDLNQLHDEYQEALDALVAAKMTGATPTAEPGEAPAGAQ
VVDLMAALRDSVRSARAARGEEAGEAGEAEEEEAAEATVHPLPARKKAAAPAKKAAATKK
KGAEKKGAEKAGAAKTTAKKAAAKKAPAKKQATGKRASGRTAS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgcggtccatctggaatgggaacatttccttcggcctggtcagcatcccgatcaagatg
tatccggcgaccgaggaccactccgtctccttccggcaggtgcacaccaaggacggcggc
cggatccgctaccgcaaggtctgcgagctcgaggacaagcagatcgacgcggacgagatc
ggcaaggcatacgaggacgccgacggcaccctgatcccgatcaccgacgaggacctggcc
cacctaccgctgcccacgacccgcgccctggagatccaggcgttcgtctcggcggcggac
atcgaccccctccagatgggcgacgcctactacctcggcgcgaacggccccgccgccgcc
aagccgtacgccctgctgcgcgaagcgctcaagcgcagcgagaaggtcgccatcaccaaa
tacgcccaccgcggccgggagcgcctgggcatgctgcgcgtcgtgggcgacgccatcgcg
atgcaccggctgctgtggcccgacgaggtgcgcaacccggtcggtgtggcccccaaggag
aatgtgacggtacgggaggcggagctcgacctcgccgacaccttgatgaacacgctcggc
gaggtggatctgaaccagctgcacgacgagtaccaggaggcgctggacgccctcgtggcg
gccaagatgaccggcgccacacccaccgccgagcccggcgaggccccggccggggcccag
gtcgtcgacctgatggcggcgttgcgggacagcgtgcgcagcgcccgcgcggcccggggc
gaggaggccggggaggccggggaggccgaggaagaggaagcggcggaggctacggtccac
ccgctgccggcgcgcaagaaggccgcagcgcccgcgaagaaggccgcggcgacgaagaag
aaaggcgccgagaagaaaggcgccgagaaggccggcgcggcgaagaccacggcgaagaag
gccgcggccaaaaaggcccccgccaaaaagcaggccaccggcaaacgggcgagcgggcgg
acggcctcctga
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