Streptomyces bingchenggensis: SBI_07002
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Entry
SBI_07002 CDS
T01678
Name
(GenBank) exodeoxyribonuclease V
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sbh
Streptomyces bingchenggensis
Pathway
sbh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SBI_07002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbh03400
]
SBI_07002
Enzymes [BR:
sbh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SBI_07002
DNA repair and recombination proteins [BR:
sbh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SBI_07002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
Helicase_RecD
AAA_16
PhoH
NPHP3_N
PIF1
TraI_hel_assoc_N
HTH_IclR
DEAD
nSTAND3
AAA
UvrD-helicase
UvrD_C
TrwB_AAD_bind
SLFN-g3_helicase
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
ADI10122
UniProt:
D7C1Q7
LinkDB
All DBs
Position
8377127..8379337
Genome browser
AA seq
736 aa
AA seq
DB search
MLKLAVVEGVLERITYANEENGYTVARVDTGRGSGDLLTVVGSLLGAQPGESLRMEGRWG
SHPQYGKQFTVENYTTVLPATVQGIRRYLGSGLIKGIGPVFADRITEHFGLDTLQIIEEE
PKRLIEVPGLGPKRTKKIADAWEEQKAIKEVMLFLQTVEVSTSIAVRIYKKYGDASISVV
KNEPYRLAADVWGIGFLTADKIAQSVGIPHDSPERVKAGLQYALSQSTDNGHCFLPEEQL
IADSVKLLQVDTGLVIECLAELADEEGVVRESVPGPDGGEPVTAVYLVPFHRAEISLAGQ
TLRLLRGAEDRMPAFQDVDWDKALAWLARHTGADLAPEQSQAVRLALTEKVAVLTGGPGC
GKSFTVRSVVELARAKKAKVVLAAPTGRAAKRLAELTGAEASTVHRLLELKPGGDAAYDR
DRPLDADLVVVDEASMLDLLLANKLVKAVPPGAHLLFVGDVDQLPSVGAGEVLRDLLADG
SPVPAVRLTRIFRQAQQSGVVTNAHRINSGVPPITHGMPDFFLFAEEDTEAAGKLTVDVA
ARRIPAKFGLDPRRDVQVLAPMHRGPAGAGTLNGLLQQSITPARPDLPERRFGGRIFRVG
DKVTQIRNNYEKGANGVFNGTVGVVTSLDSDEQRLTVLTDEDEEVAYDFDELDELAHAYA
VTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKRLVVLVGSRRALGQAVRTVSA
GRRCTALDHRLGSFST
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaactcgcggtggtcgaaggggtcctggagcggatcacctacgccaatgaggag
aacggctatacggtcgcccgggtcgacaccggccgcggctccggggatctgctcaccgtc
gtcggctcgctgctgggcgcgcagcccggcgagtcgctgcggatggagggccgctggggc
tcccacccgcagtacggcaagcagttcaccgtcgagaactacaccaccgtgctgcccgcc
accgtccagggcatccggcgctatctgggctccggcctgatcaagggcatcgggcccgtc
ttcgccgaccgcatcaccgagcacttcggcctggacaccctgcagatcatcgaggaggag
ccgaagcggctgatcgaggtccccggcctcggcccgaagcgcacgaagaagatcgccgat
gcctgggaggagcagaaggcgatcaaggaggtcatgctcttcctccagacggtggaggtg
tccacgtccatcgccgtgcggatctacaagaagtacggcgacgcctcgatctcggtcgtg
aagaacgagccgtaccggctggccgccgatgtctggggcatcggctttctgaccgccgac
aagatcgcccagtccgtcggcatcccgcatgacagccccgagcgggtgaaagccggattg
cagtacgcgctgtcccagtcgacggacaacggccactgcttcctccccgaggagcaactg
atcgcggactcggtcaagttgctccaggtcgacaccggcctggtcatcgagtgcctggcc
gagctggccgacgaggagggcgtggtgcgcgagagcgtgccgggcccggacggcggcgag
ccggtcacggccgtgtatctggtgccctttcaccgcgccgagatctccctcgcaggtcag
acgctgcggctgctgcgcggcgcggaggaccgtatgcccgccttccaggacgtggactgg
gacaaggcgctggcctggctcgcccggcacaccggggccgatctggcccccgagcagagc
caggcggtgcggctcgcgctgaccgagaaggtcgcggtgctgaccggcgggccgggctgc
ggcaagtccttcacggtgcggtccgtggtggagctggcgcgcgccaagaaggccaaggtg
gtgctcgcggcccccaccggccgggccgccaagcggctcgccgagctgaccggcgccgag
gcgtccacggtccaccggctgctggagctcaagcccggcggggacgcggcgtacgaccgg
gaccggccgctggacgccgatctggtggtggtggacgaggcgtccatgctcgatctgctg
ctggccaacaaactggtcaaggcggtcccgccgggcgcccatctgctcttcgtcggggat
gtggaccagctgccgagcgtcggcgcgggcgaggtgctgcgcgatctgctggccgacggc
agccccgtcccggcggtgcggctgaccaggatcttccgccaggcccagcagtccggcgtg
gtcaccaacgcccaccggatcaactccggcgtgccgccgatcacccacggcatgcccgac
ttcttcctgttcgccgaggaggacaccgaggccgccgggaagctcacggtggatgtggcg
gcccgtcggatccccgccaagttcggcctcgacccgcgccgggatgtgcaggtcctggcc
ccgatgcaccgtggcccggcgggcgccgggacgctcaacggcctcctccagcagtccatc
acccccgcccggccggatctgcccgagcggcgcttcggcggccggatcttccgcgtcggc
gacaaggtcacccagatccgcaacaattatgagaaaggggccaatggggtcttcaatggc
acggtgggcgtcgtcacctccctcgacagcgatgagcagcgcctgaccgtgctgaccgac
gaggacgaggaggtggcgtacgacttcgacgagctggacgagctggcacacgcctatgcg
gtgaccatccaccgctcacagggcagcgagtacccggccgtggtcatcccggtgaccacc
ggcgcctggatgatgctgcagcgcaatctgctgtatacggcggtgacccgcgccaagcgc
ctggtggtgctcgtcggctcgcgccgcgccctgggacaggcggtgcggacggtgtcggcg
ggcaggaggtgcaccgcactggaccaccggctcggctcgttcagcacctga
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