Streptomyces bingchenggensis: SBI_08021
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Entry
SBI_08021 CDS
T01678
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
sbh
Streptomyces bingchenggensis
Pathway
sbh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SBI_08021 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbh03400
]
SBI_08021 (uvrA)
DNA repair and recombination proteins [BR:
sbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SBI_08021 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SBI_08021 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_16
AAA_21
nSTAND1
AAA_33
AAA_25
AAA_22
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
ADI11141
UniProt:
D7CGR1
LinkDB
All DBs
Position
9494837..9497854
Genome browser
AA seq
1005 aa
AA seq
DB search
MADRLIVRGAREHNLKNVSLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARIGKPH
CPECGRPISRQSPQAIVDKVLELSEGSRFQVLSPLVRERKGEFVDLFADLQTKGYSRARV
DGTTIQLTDPPKLKKQEKHTIEVVIDRLTVKDSAKRRLTDSIETALGLSGGMVILDFVDL
DEDDPQRERMFSEHLYCPYDDLSFEELEPRSFSFNSPFGACPECTGIGTRMEVDPELIIP
DEEKSLDEGAIHPWSHGHTKDYFARLYGGLADALGFRTDIPWAGLPQRAKKALLYGHKTQ
IEVRYRNRYGRERAYVTSFEGAVPFVRRRYTEAESDSSRERFEGYMREVPCPTCEGTRLK
PLILAVTVEGRSIAEVSAMSISECAEFLRDMKLSARDKTIAQRVLKEVNERLRFLVDVGL
DYLSLNRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLVRLR
DLGNTLIVVEHDEDTIKTSDWVVDIGPGAGEHGGKVVHSGPLAELLANEESMTGQYLAGK
KSIELPGMRRPMDPERQLTVHGARENNLQDIDVSFPLGVLTAVTGVSGSGKSTLVNDILY
THLARELNGARAVPGRHTRVAGDDLVDKVVHVDQSPIGRTPRSNPATYTGVFDHVRKLFA
ETMEAKVRGYLPGRFSFNVKGGRCENCSGDGTIKIEMNFLPDVYVPCEVCHGARYNRETL
EVHYKGKSIAEVLDMPIEEGLDFFEAVPTIARHLRTLNEVGLGYVRLGQPAPTLSGGEAQ
RVKLASELQKRSTGRTVYVLDEPTTGLHFEDISKLIKVLSGLVDKGNTVIVIEHNLDVIK
TADWVVDMGPEGGSGGGLVVAEGTPEEVASVPASHTGKFLREMLGDLVSDAVAPVGRKSV
KKAPAKAPAKAPAKKAAAKKAVAKKTVATKAAAKTTVSGRRAAAK
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaccgtctcatcgtccgtggcgctcgcgagcacaacctcaagaacgtctcgctc
gaccttcctcgcgactccctcatcgtcttcaccgggctctccgggtcgggcaagtcctcc
ctcgcgttcgacacgatcttcgcggagggccagcgccgttacgtcgagtccctctcctcg
tacgcgcgccagttcctggggcagatggacaagcccgacgtggacttcatcgagggcctg
tcccccgcggtgtccatcgaccagaagtccacctcgcgcaacccccgctccacggtcggc
accatcacggaggtctatgactacctccggctgctgttcgccaggatcggcaagccgcac
tgccccgagtgcggccgcccgatctcccgccagtcgccgcaggcgatcgtcgacaaggtg
ctggagctgtccgagggcagccgcttccaggtgctgtcgccgctggtgcgcgagcgcaag
ggggagttcgtcgacctcttcgccgatctgcagaccaagggctacagccgggcgcgggtg
gacggcacgaccatccagctgaccgacccgccgaagctgaagaagcaggagaagcacacc
atcgaggtggtcatcgaccgcctgacggtcaaggacagcgccaagcggcggctgaccgac
tccatcgagaccgcgctcgggctctccggcggcatggtgatccttgacttcgtggacctc
gacgaggacgacccgcagcgcgagcggatgttctccgagcacctttactgcccgtacgac
gacctgtccttcgaggagctggagccgcgctccttctccttcaactcgcctttcggcgcc
tgtccggagtgcaccggcatcggcacccgtatggaggtcgaccccgagctgatcatcccg
gacgaggagaagtcgctcgacgagggcgccatccacccctggtcccacggccacaccaag
gactacttcgcccggctgtacggcgggctggccgacgcgctcgggttccgtacggacatc
ccctgggccgggctcccgcagcgcgccaagaaggcgctgctctacgggcacaagacgcag
atcgaggtccgctaccgcaatcgctacgggcgggagcgcgcctacgtcacgtccttcgag
ggcgcggtgcccttcgtccggcggcggtacacggaggcggagagcgattccagccgcgag
cgcttcgagggctatatgcgcgaggtgccctgccccacctgtgagggcacccggctcaag
ccgctcatcctggcggtcacggtggagggccgctccatcgcggaggtctccgcgatgtcg
atcagcgagtgcgccgagttcctgcgcgacatgaagctgagcgcccgcgacaagaccatc
gcccagcgggtgctcaaggaggtcaacgagcggctgcggttcctggtcgacgtcggcctg
gactatctctcgctcaaccgcgcggcgggcacgctctccggcggcgaggcgcagcgcatc
cggctggccacccagatcggctccggcctggtcggcgtgttgtacgtactggacgagccg
tcgatcgggctgcaccagcgcgacaaccaccggctgatcgagacgctggtgcggctgcgc
gacctgggcaacaccctgatcgtcgtcgagcacgacgaggacaccatcaagacctcggac
tgggtggtggacatcggccccggcgcgggcgagcacggcggcaaggtcgtccacagcggg
ccgctcgcggagctgctggccaacgaggagtcgatgaccgggcagtatctggccgggaag
aagtccatcgagctgccggggatgcgccgccccatggacccggagcggcagctgacggtc
cacggcgcccgggagaacaatctccaggacatcgatgtgtccttcccgctcggtgtgctc
accgccgtcaccggcgtctccggatcgggtaagtccaccctggtcaacgacatcctgtac
acccacctggcgcgcgagctgaacggggcgcgggccgtcccgggccggcacacccgggtc
gccggcgacgacctcgtcgacaaggtggtgcatgtcgaccagtcgcccatcggccgcacc
ccgcgctccaacccggcgacgtacaccggcgtcttcgaccatgtgcgcaagctgttcgcg
gagacgatggaggccaaggtccgcgggtacctgcccgggcgcttctccttcaacgtcaag
ggcggccgttgcgagaactgctccggcgacggcaccatcaagatcgagatgaacttcctg
ccggatgtgtatgtgccgtgcgaggtctgccacggcgcccgctacaaccgggagacgctg
gaggtgcactacaagggcaagtccatcgccgaggtgctggacatgcccatcgaggagggg
ctcgacttcttcgaggcggtgccgaccatcgcccgccatctgcgcacgctcaacgaggtc
gggctcggctatgtccggctcgggcagcccgcgccgaccctctccggcggcgaggcgcag
cgcgtcaagctcgcgagcgagctgcagaagcggtcgacggggcgcacggtctacgtcctg
gacgagcccacgaccgggctgcacttcgaggacatcagcaagctgatcaaggtgctgtcc
ggactggtcgacaagggcaatacggtgatcgtcatcgagcacaacctcgatgtgatcaag
acggccgactgggtcgtggacatgggcccggagggcggcagcggcggcggtctggtcgtc
gccgagggcacccccgaggaggtggcctcggtcccggccagccacaccggcaagttcctc
agggagatgctgggggacctggtgagcgacgcggtggcgccggtcggccggaagtccgtg
aagaaggcccccgcgaaggcccctgccaaggctccggcgaagaaggcggcagccaagaag
gccgtggccaagaagaccgtggccacgaaggcggcggcgaagacgactgtctccggacgg
cgcgcggcggcgaagtag
DBGET
integrated database retrieval system
