Streptomyces bingchenggensis: SBI_08109
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Entry
SBI_08109 CDS
T01678
Name
(GenBank) putative secreted pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sbh
Streptomyces bingchenggensis
Pathway
sbh00040
Pentose and glucuronate interconversions
sbh01100
Metabolic pathways
sbh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sbh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SBI_08109
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SBI_08109
Enzymes [BR:
sbh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SBI_08109
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
DUF3693
Motif
Other DBs
NCBI-ProteinID:
ADI11227
UniProt:
D7CI49
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All DBs
Position
9592816..9594213
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AA seq
465 aa
AA seq
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MRMAHPQGRGVPAISRAKRTGWTRLGTTALAAVALVGLTLPAGAQAEPPAFSRDYAPAPG
RDLGRDVLGADDGWAAEGAGTTGGAAADDAQVFTVRTRAQLAAALDGGSPVPKIIYVRGT
IDANTDAQGRPLSCADYATDGYTTEKYLTAYDPRTWGGQKPSGPQEEARAASAARQAERV
ELAVGSNTTLVGIGRDAVLKGASLQVKDASNVIARNLELRDAYDCFPVWQPNTGGLGDWK
TAYDNIWLRGANHVWVDHVTISDKGHPDAAEPTYFGRNYLRHDGLLDITNGSDLVTVSWS
RFADHDKAMLIGNGDNVTTDRGKLRVTLHHNSFKGVAQRAPRVRFGQVHVYNNAYEVPEG
ADYRYSWGVSTESRIYAENNAFTTPGHVEAADLVKSWNGSALHQSGAEFNGYPVDLLAIH
NSYNSGSERDLEPDVGWTPALHGPIDGAAKAAKDVARGAGAGRIG
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatggcgcacccccagggacggggggttccagcgatatcgcgcgcgaagcgcacg
gggtggacccggctcggcacgacggccctggcggcggtcgcgctcgtcgggctgaccctg
cccgccggggcgcaggcagagccgccggcgttcagccgtgactacgcccccgcccccggc
cgtgacctcgggcgcgatgtgctcggggcggacgacggatgggcggcggagggcgccggg
accaccggcggggccgcggccgacgacgcgcaggtgttcaccgtacggacccgggcgcag
ctggccgccgcgctggacggcggcagccccgtaccgaagatcatctacgtccgggggacc
atcgacgccaacaccgatgcccagggacgtccgctgagctgcgcggactacgccaccgac
ggctacaccaccgagaagtacctgaccgcctacgacccccgcacctggggcggccagaag
ccctccggcccgcaggaggaggcccgcgccgcctccgccgcgcgccaggccgagcgggtc
gagctggccgtcggctccaacaccaccctcgtgggcatcggccgggacgccgtcctcaag
ggcgcgagcctccaggtcaaggacgcctccaacgtcatcgcccgcaacctcgaactgcgc
gacgcctacgactgcttccccgtctggcagcccaacaccggcggccttggagactggaag
accgcgtacgacaacatctggctgcgcggcgcgaaccacgtgtgggtcgaccatgtgacc
atcagcgacaagggacaccccgacgccgccgagcccacctacttcggccgcaactacctg
cgccacgacgggctgctggacatcaccaacggctcggacctggtgaccgtctcctggagc
cggttcgccgaccacgacaaggccatgctcatcggcaacggcgacaacgtcaccacagac
cgcggcaagctgcgcgtcaccctccaccacaacagcttcaaaggcgtcgcccagcgcgct
ccccgggtccgcttcggccaggtccacgtctacaacaacgcctacgaggtccccgagggc
gccgactaccgctactcgtggggcgtatccactgagtcacggatctacgccgagaacaac
gcgttcaccacgcccggccatgtcgaggccgccgacctggtcaagagctggaacggcagc
gccctgcaccagagcggagctgagttcaacggctaccccgtcgacctgttggccatccac
aactcgtacaactccggcagcgaacgcgacctcgaacccgacgtgggctggacccccgcc
ctgcacggcccgatcgacggcgcagccaaggcggccaaggacgtggcgcgcggcgcgggc
gccgggcggatcggctga
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