Streptomyces bingchenggensis: SBI_08116
Help
Entry
SBI_08116 CDS
T01678
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sbh
Streptomyces bingchenggensis
Pathway
sbh00040
Pentose and glucuronate interconversions
sbh01100
Metabolic pathways
sbh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sbh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SBI_08116
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SBI_08116
Enzymes [BR:
sbh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SBI_08116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ADI11234
UniProt:
D7CI56
LinkDB
All DBs
Position
9602285..9603592
Genome browser
AA seq
435 aa
AA seq
DB search
MRTPRCHARVASLASVLCCAALVLAAAPATAAPLAPVRGTLPAGDGWASADGGTTGGAKA
DKAHTFTVTNRAQLAKALDGSDGSPRTIYVKGTIDANTDAAGKPLSCADYATDGYGLDAY
LAAYDPATWGDAQPSGPQEDARAASAALQAKRVKLAVPSHTTIVGVGRDARLLGASLQVT
GADNVIVRNLTFEDAFDCFPAWDPTDGADGAWNSEYDNLVVYGSTHVWVDHNTFTDGRRP
DSAQPRYYGQLYQQHDGELDVVRGADLVTASWNLFADHDKTLMIGNSDSAGATDRGKLRV
TLHHNVFKNIVERAPRVRFGKVDVYNNHYIAPADGYSYSWGVGVESQLHAEANAFTLPGT
VDPAKVIKKWKGTALTEKNNYVGGKPAGLLAAHNAGVPEEQLGDDAGWTPTLRTRVDVPG
AVPGIVDGRAGAGRL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcgcactcccagatgtcatgcccgcgtcgcctcgctcgcctcggtgctctgctgcgcc
gccctcgtactcgccgccgcccccgccacggcagcccccttggcgcccgtacgcggcacc
ctcccggcgggcgacggctgggcctccgccgacggcggcacgaccggcggcgccaaggcc
gacaaggcccacaccttcaccgtcaccaaccgggcccagctcgccaaggccctcgacggc
tccgacggcagcccgcggaccatctacgtcaagggcaccatcgacgccaacaccgacgcc
gccggcaagccgctgagctgcgccgactacgccaccgacggctacggcctggacgcctac
ctcgccgcgtacgacccggccacctggggcgacgcccagccgtcaggaccgcaggaggac
gcccgcgccgcctctgccgcgctgcaggcgaagcgcgtcaagctggccgtcccctcccac
accaccatcgtcggcgtcggccgggacgcccggctgctgggcgccagcctccaggtcacc
ggcgcggacaacgtcatcgtccgcaatctcaccttcgaggacgccttcgactgcttcccc
gcctgggacccgaccgacggcgcggacggcgcctggaactccgagtacgacaacctcgtc
gtctacggctccacccatgtctgggtcgaccacaacaccttcaccgacggccgccgcccc
gacagcgcccagccccgctactacggccagctctaccagcagcacgacggcgaactggac
gtggtgcgcggcgccgacctcgtcaccgcctcctggaacctcttcgccgaccacgacaag
acgctgatgatcggcaacagcgacagcgcgggcgccaccgaccgcggcaagctccgcgtc
accctccaccacaacgtcttcaagaacatcgtcgagcgcgccccgcgggtccgcttcggc
aaggtcgacgtctacaacaaccactacatcgcccccgccgacggctactcctacagctgg
ggcgtcggcgtcgagtcccagctgcacgccgaggccaacgccttcaccctgcccggcacg
gtcgaccctgccaaggtcatcaagaagtggaagggcacggcgctcaccgagaagaacaac
tatgtgggcggcaagcccgccggcctcctcgccgcccacaacgcgggcgtccccgaagag
cagttgggcgatgacgcgggctggacgccgacgctgcgcacccgcgtcgacgtaccgggc
gcggtgcccggcatcgtcgacggacgcgcgggcgcgggccgcctctga
DBGET
integrated database retrieval system
