Streptomyces bingchenggensis: SBI_08496
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Entry
SBI_08496 CDS
T01678
Name
(GenBank) ATP-dependent RNA helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
sbh
Streptomyces bingchenggensis
Brite
KEGG Orthology (KO) [BR:
sbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbh03019
]
SBI_08496
Enzymes [BR:
sbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SBI_08496
Messenger RNA biogenesis [BR:
sbh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SBI_08496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ADI11614
UniProt:
D7BU65
LinkDB
All DBs
Position
10092416..10095244
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AA seq
942 aa
AA seq
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MTDELSPAERYTAARLRAAEEATALAPFREMYDFELDPFQIEACKALEAGKGVLVAAPTG
SGKTIVGEFAVHLALTQGRKCFYTTPIKALSNQKYTDLVKRYGADRVGLLTGDNSINSEA
PVVVMTTEVLRNMLYAGSQSLLGLGYVVMDEVHYLSDRFRGAVWEEVIIHLPESVTLVSL
SATVSNAEEFGDWLDTVRGDTEVIVSEHRPVPLWQHVLAGRRMYDLFEEKSGQGDGQVGR
REVNPDLVRLARMENTRPSFGRDKRRGRNNMREADRERERRQRSRIWTPGRPEVIERLDA
EGLLPAITFIFSRAGCEAAVQQCLYAGLRLNDEAARARVRSIVEERTSGIPDEDLHVLGY
FEWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVKAVFATETLALGINMPARSVVLEKL
VKWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAVVLWQRAMDPAALAGLAGTRTYPLRS
SFKPSYNMAVNLVSQFGWHRSRELLETSFAQFQADKAVVGISRQVQRNEEGLRGYRASMT
CHLGDFDEYARLRRDLKDRETELAKQGVAQRRVAAADALEKLRPGDVIHVPTGKYAGLAL
VLDPGLPAGRTGGHRGLEYHDGPRPLVLTVERQVKRLAAIDFPVPVEPLERMRIPRSFNP
RSPQSRRDLASALRTKAGHHEMRRHRKERSAAADDTEIARLRATLRAHPCHGCDEREDHA
RWAERYHRLLRDTRQLERRIEGRTNTIARTFDRICALLSELGYLSGEEVTDDGKRLARLY
GELDLLASECLREGVWEGLAPAELAACASALVYEARAADDAMPPKLPAGRAKGALGEMVR
IWGRLDALEDDHKIKQAEGVGQREPDLGFAWAAYRWASGHGLDELLREVDMPAGDFVRWC
KQVIDVLGQIAVAAPAGGTVARAARRAVDALLRGVVAYSSVG
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgagctatctcccgccgagcgctacaccgcggcccgtctgcgggcggccgag
gaggccaccgcgctggcccccttccgcgagatgtacgacttcgagctggacccgttccag
atcgaggcatgcaaggccctggaggccgggaagggcgtgctggtcgccgcccccaccggc
tcgggcaagaccatcgtgggcgagttcgccgtccacctggcgctcacccagggccgcaag
tgtttctacaccacgcccatcaaggcgctgtcgaaccagaagtacaccgacctcgtcaag
cgctacggcgccgaccgcgtcggcctgctcaccggtgacaacagcatcaactccgaggcc
ccggtggtcgtgatgaccaccgaggtgttgcggaacatgctgtatgcgggctcccagtcg
ctgctggggctcggctatgtggtgatggacgaagtccactacctctccgaccggttccgc
ggcgccgtctgggaagaggtcatcatccatctccccgagtcggtcacgctggtgtcgctg
tccgccaccgtgtccaacgcggaggagttcggcgactggctcgacacggtccgcggcgac
accgaagtgatcgtctccgagcaccgccccgtcccgctgtggcagcatgtgctggccggg
cgccggatgtacgacctcttcgaggagaagagcgggcagggggacggccaggtcggccgc
cgggaggtcaaccccgacctggtccggctggcccggatggagaacacccgccccagcttc
ggccgcgacaagcgccgcgggcggaacaatatgcgcgaggccgaccgggagcgcgagcgc
cgtcagcgcagccggatctggacccccggcaggcccgaggtcatcgagcggctggatgcc
gaggggctgctgcccgcgatcaccttcatcttcagccgggccggctgcgaggcggccgta
cagcagtgcctgtacgccgggttgcggctcaacgacgaggcggcgcgcgcgcgggtgcgc
tccatcgtcgaggagcgcacgtcgggcataccggacgaagacctgcatgtgctgggctac
ttcgaatggctggagggcctggagcggggcatcgccgcccatcacgccgggatgctgccg
acgttcaaggaagtcgtggaggagctgttcgtccgcgggctggtcaaggcggtgttcgcc
accgagaccctggcgctcggcatcaacatgcccgctcgttccgtggtgttggagaagctg
gtcaagtggaacggtgagcagcacgccgacatcacccccggcgagtacacccagctgacc
ggccgggccggccggcgcggaatcgacgtcgagggccatgccgtggtgctgtggcagcgc
gcgatggacccggccgccctcgcgggcctggcgggtacccgtacgtatccgctgcgctcc
tccttcaagccctcgtacaacatggcggtcaatctggtctcgcagttcgggtggcaccgc
tcccgcgagctgctggagacctccttcgcgcagttccaggccgacaaggcggtcgtcggc
atctcccggcaggtgcagcgcaacgaggagggcctgcgcggctatcgcgcctccatgacc
tgccacctgggcgacttcgacgagtatgcgcggctgcgccgcgacctgaaggaccgcgag
accgagctggccaagcagggcgtggcgcagcggcgcgtggccgccgccgacgcgctggag
aagctgcgccccggcgatgtcatccacgtcccgaccggcaagtacgcggggctggcgctg
gtgctcgaccccgggctgccggccgggcgtacgggcggccatcgcggactggagtaccac
gacgggccgcgcccgctcgtgctcaccgtcgagcggcaggtcaagcggctggccgcgatc
gacttcccggtgccggtcgagccgttggagcggatgcggatcccccggtccttcaacccg
cgcagcccgcagtcccgccgggacctggcgtccgcgctgcgcaccaaggcgggccaccac
gagatgcgccgccaccgcaaagagcgctcggcggcggccgacgacaccgagatcgcccgg
ctgcgcgccactctccgggcccacccctgccacggctgcgacgagcgcgaggaccacgcc
cgctgggccgagcgctaccaccggctgctgcgcgacacccgccagttggagcggcgcatc
gaggggcgtacgaacaccatcgcgcgcaccttcgaccggatctgcgccctgctgtcggag
ctcggctatctgagcggcgaggaggtcaccgacgacggcaagcggctcgcccggctctac
ggcgagctcgacctgctcgccagcgagtgcctgcgcgagggcgtatgggaggggctggcc
cccgccgagctcgcggcctgcgcctccgcgctggtctacgaggcgcgggcggcggacgac
gcaatgccgcccaagctgcccgcgggccgggccaagggtgccctgggcgagatggtccgc
atctggggccggttggacgccctggaagacgatcacaagatcaagcaggcggagggggtc
ggccagcgcgagcccgatctgggcttcgcctgggccgcgtaccgctgggcctccggacac
ggtctggacgagctgttgcgcgaagtcgacatgcccgcaggcgacttcgtgcgctggtgc
aagcaggtgatcgacgtgctgggccagatcgccgtggccgccccggcgggcggcacggtg
gcacgagccgcccgccgggcggtcgacgcgctgctgcgcggtgtggtggcgtactcctcc
gtgggctga
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