Streptomyces bingchenggensis: SBI_08827
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Entry
SBI_08827 CDS
T01678
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sbh
Streptomyces bingchenggensis
Brite
KEGG Orthology (KO) [BR:
sbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbh03400
]
SBI_08827
DNA repair and recombination proteins [BR:
sbh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SBI_08827
Archaeal homologous recombinant proteins
SBI_08827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
SMC_N
AAA_29
AAA
Motif
Other DBs
NCBI-ProteinID:
ADI11945
UniProt:
D7BY65
LinkDB
All DBs
Position
10461683..10465138
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AA seq
1151 aa
AA seq
DB search
MRLHRLTMTAFGPFGTTQEVDFDELSSAGLFLLHGPTGAGKTSVLDAVCYGLYGQVPGAR
QGSGLSLRSDHADPHTPTEVVLELTVGGRRLEITRRPEQPRPKKRGTGTTREKAQSRLRE
YLPGAGEWKALSRSHQEIGEEISQLLGMSKEQFCQVVLLPQGDFARFLRADEMARGKLLG
KLFDTGRFAAVEERLAELRRAAEKQVVGGDERLLALAHRMSQAAGPGDHTLPDLAPGEPG
LADAVLEWAAIARTTARERQDIALAALQATETAHQAARRTADAARERARLQRRHAEARHR
ADELERRRAEYDRTRARLEQARAADAVVPALEFHATAEREHTTATTAERAARGRLAAEPG
LELDGPDSADALAPGEIGLPGPRTAAKRPTVGAAAGQAATEPSAAGWGRASGAAEPTGSA
PGPGSGSGADRPGLAGDSFGRRFGEPPRADAAVSGARGLPQPEAPRRGGAPGSVGDGASQ
SVDGSPDAGSAQEPRARVGRPGLAGADAARLAAEERRLREELGSLGAARRAELRAGEVAA
EVAGLDRQARADEEAIEEAGQWLAGWETARQAHTRRVEAAQEAVTRAEQLAGQLAPARQR
LEAARRRDALAGQATEAEQRLLRSREAAAVAHETWLDLKDRRLRGIAAELAAGLSGGEPC
AVCGATEHPRPARPGAGHVDRTAEEAALAAHRRAEAGREEAERGLQSLREALAGAEAAAG
GGTADELDRAVADLETALAEARGAGADGHAAREALAHAQEEHDRRLAQRQEAERRAAART
SRREALLRERAGLLAELERARGGAATVAERAARLERHAGLLSRAAETAREAEAAARRLEE
AGARLVDAARRAGFEEPNAAARAVLPAADQRGLRHRLEQWQTESAAVAAELADPQVVAAA
QEPLADPTAAEAAADAATRALREGSARDAAARTRCQELDRLSAQAVTDARRLAPLREEHD
RLARLATLAAGTSGENERKMRLEAYVLAARLEQVAAAASARLRLMSAGRYTLVHSDARTG
GRGRSGLGLHVIDAWTGSERDTATLSGGETFFVSLSLALGLADVVTDEAGGTRLDTLFID
EGFGSLDEQTLDEVLDVLDSLRERDRTVGIVSHVADLRQRIPVRLEVVKGRDGSAVRHRT
AGGTAGAGGRT
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcaccgcctcaccatgaccgccttcgggcccttcggcaccacccaagaggtc
gacttcgacgagctctcgtccgccgggctcttcctgctgcacgggcccaccggcgcgggc
aagacatccgtcctggacgcggtctgctacggcctgtacggccaggtccccggcgcccgg
cagggcagcgggctgtccctgcgcagcgaccacgccgatccgcacacccccaccgaggtc
gtcctcgaactcaccgtcggcggacggcgcctggagatcacccgccgccccgaacagcca
cgccccaagaagcgcggcaccggcaccacgcgcgaaaaggcgcagagccgactgcgcgaa
tacctccccggagccggggaatggaaggcgctcagccgctcccaccaggagatcggcgag
gagatctcacagctgctcggcatgagcaaggagcagttctgccaggtggtgctgttgccc
cagggcgacttcgcccgctttctgcgcgccgatgaaatggcccgcggcaagctgctcggc
aagctcttcgacacgggccgcttcgccgccgtcgaggaacgcctcgccgagctgcggcgc
gcggcggagaagcaggtcgtcggcggcgacgaacggctgctcgccctcgcccaccgcatg
tcccaggccgccggacccggcgaccacacactgccggacctcgcccccggcgaaccgggg
ctggccgacgccgtactggagtgggccgccatcgcccgtacgaccgcccgcgagcggcag
gacatcgcactcgcggccctccaggccaccgaaaccgcccaccaggccgcgcgccgaacc
gccgacgccgcccgcgagcgcgcccgcctccaacgccgccacgccgaggcccgccaccgc
gccgacgagctcgagcgccgacgcgccgagtacgaccggacccgagcccgcctggagcag
gcccgcgcggccgacgcagtcgtccccgccctggaattccacgccaccgccgaacgcgaa
cacaccaccgccaccaccgccgagcgcgccgcccgcggccgcttggcggccgagcccggc
ctggaactcgacgggccggactcggcggacgccctggcaccgggcgagatcggcctcccg
ggcccgcgcacggcggccaagcgcccgacggtgggcgctgcagccgggcaggcggccact
gaaccgtcggccgcgggatggggacgcgcgagcggcgcggccgagccgacaggttccgcc
cccggacccggctcgggctcgggcgccgaccggccgggcctggcgggcgacagcttcggg
cggcgcttcggggagccgccgcgggcggacgccgccgtgagcggggcgcgcgggctgccg
cagcctgaggccccgcggcgcggcggtgcgccgggctcggtgggcgacggcgcgagccag
tccgtcgacgggtcgccggacgcgggctccgcgcaggagccccgggcgcgcgtgggcagg
ccggggctcgcgggggcggacgccgcgcggctggccgctgaggagcggcggctgcgggag
gagttggggtcgctgggcgcggcgcggcgggccgagctgcgggccggggaggtggccgcc
gaggtcgcggggctggaccggcaggcgcgggccgacgaggaggcgatcgaggaggccggg
cagtggctcgccgggtgggagacggcccgccaggcgcatacgcggcgcgtcgaggcggcg
caggaggccgtaacccgggccgaacagctcgccgggcagctcgcccccgcccggcagcgc
ctggaagccgcgcggcgccgggacgccctggccgggcaggcgaccgaggcggaacagcgc
ctgctgcgctcccgcgaagcagccgccgtcgcgcacgagacctggctcgacctcaaggac
cggcggctgcgcggcatcgccgccgagctggcggcggggctgagcgggggcgagccgtgc
gcggtgtgcggggcgaccgaacacccccgccccgcgcgcccgggcgccggccatgtggac
cgtacggcggaggaggccgcgctggcggcccaccggcgggccgaggccgggcgggaggag
gccgagcgggggctgcagtcgctgcgggaggcgctggcaggcgcggaggccgccgccggc
ggcggcaccgcggatgaactggaccgcgccgtcgccgacttggagaccgcgctcgccgag
gcccgcggcgccggggccgacggccacgccgcgcgcgaggcgcttgcccacgcccaggaa
gagcacgaccggcgcctggcccagcgccaggaagccgagcggcgcgccgccgcgcgcacc
tcgcggcgcgaggccctgctgcgggagcgggccgggctgctggcggagttggagcgggcc
cgcggcggagccgccactgtggccgagcgcgccgcccggctggagcgccacgcggggctg
ctgtcccgggccgccgagacggcccgcgaggccgaggccgccgcgcggcggcttgaggag
gccggggcgcggctcgtcgacgccgcgcgccgcgcgggcttcgaggagccgaacgccgcg
gcccgcgccgtactgcccgcggcggaccagcgcgggctgcggcaccgcctggagcagtgg
cagacggagtccgcggccgtcgcggccgagctcgccgatccgcaggtggtcgccgccgcg
caggagcccctggccgatcccaccgccgccgaggccgcggccgacgcggccacccgcgcg
ctgcgcgagggctcggcgcgggacgcggcggcccgtacccgctgccaggaactggaccgc
ctctccgcccaggccgtcaccgacgcgcgccgactcgccccgctccgcgaggagcacgac
cgcctcgcccgtctcgccactctcgccgcgggcacctccggcgagaacgagcggaagatg
cgcctggaggcgtacgtcctggccgcccggctcgaacaggtcgcggccgcggccagcgcc
cggctgcggctcatgtccgccgggcgctacaccctcgtccactccgacgcccggacgggc
ggccgcggcaggtcgggtctcggcctgcatgtcatcgacgcctggaccggcagcgaacgc
gacaccgccaccctctccggcggcgagaccttcttcgtctcgctctcgctggccctcggc
ctcgccgacgtggtgacggacgaggcgggcggcacccggctggacaccctcttcatcgac
gagggtttcggcagcctggacgagcagaccctcgacgaggtcctggacgtgctcgactcg
ctgcgcgagcgggaccgtacggtcggcatcgtcagccatgtcgcggacctccgccagcgc
atcccggtgcggctggaggtggtgaagggccgcgacggatcggcggtccgccaccgtacg
gccgggggcacggccggagcgggagggcggacctga
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