Streptomyces bingchenggensis: SBI_09067
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Entry
SBI_09067 CDS
T01678
Symbol
mutM3
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sbh
Streptomyces bingchenggensis
Pathway
sbh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SBI_09067 (mutM3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbh03400
]
SBI_09067 (mutM3)
Enzymes [BR:
sbh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SBI_09067 (mutM3)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SBI_09067 (mutM3)
DNA repair and recombination proteins [BR:
sbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SBI_09067 (mutM3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Zn_ribbon_TFIIB
Zn_ribbon_8
zf-C2HC_3
Zn_ribbon_6
PknG_rubred
Zn_ribbon_IS1595
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-ProteinID:
ADI12185
UniProt:
D7C1Y4
LinkDB
All DBs
Position
10757604..10758326
Genome browser
AA seq
240 aa
AA seq
DB search
MERVEVSDAGVLRGVTAQRLRRELTGRRFDPPERHGKWLIARTDGPTVLLHFGMTGDLTC
HAHDDPPHPHDRVTIVLDDGHDLRYRDQRKLRGLWLAATDADLDRILGDQGPDALSVSRA
ELDKRLAGRHGRVKATLTDQSVVAGLGNLLGDEILWRAGINPARRTDELTPEERTRLERA
MRGVLLTSVQAGHVPTSPSWLTGRRDDPDPHCPRCGGPLRRSRMAGRTTAWCPHCQPGGA
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtggagcgcgtcgaggtgagcgacgccggggtgctgcgcggggtgacagctcagcggctg
cggcgagagctgaccggccgccgcttcgatccaccggagcggcacggcaaatggctgatc
gcccgcaccgacggtcccaccgtactcctgcacttcgggatgaccggagacctgacgtgc
catgcgcacgatgacccgccccatccgcacgaccgcgtcaccatcgtcctcgacgacggc
cacgacctccgctaccgggaccagcgcaaactgcgcggcctgtggctggccgccaccgac
gccgacctcgaccggatcctgggcgaccagggcccggacgcgctgtccgtcagccgcgcc
gaactcgacaagcggctggcggggcggcacggacgggtcaaggcgaccctcaccgaccag
tccgtcgtcgccgggctcggcaatctcctcggcgacgagatcctgtggcgcgccggcatc
aacccggcgcggcggaccgacgagctgacccccgaggaacgcacccggctggagcgtgcg
atgcgcggtgtgctgctcacctcggtccaggccggacacgtgcccaccagcccctcctgg
ctcaccggccgccgcgacgaccccgacccgcactgcccgaggtgcggcggcccgctgcgc
cgcagccggatggccgggcggaccaccgcctggtgcccccactgccagccgggcggggca
tga
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integrated database retrieval system
