Sorghum bicolor (sorghum): 110429746
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Entry
110429746 CDS
T01086
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110429746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
110429746
03036 Chromosome and associated proteins [BR:
sbi03036
]
110429746
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110429746
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110429746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
110429746
NCBI-ProteinID:
XP_021301888
LinkDB
All DBs
Position
8:913987..920262
Genome browser
AA seq
923 aa
AA seq
DB search
MFGSTNPFGQSSTNAFGQTSFGTPQGFGQSSTAANNPFAPKPFGSPTTTFGAQTGSSLFA
TTSTGAFGQQQSTPAFGTTSTGAFGQQQSTPTFGTPSSSPFGSSTPAFGASPTPAFGATS
SGSLFGQKPSFGGFGSSPSQPSPFGSTFQQTQPTFGSTTFGASTTPAFGTTTTPAFGTTT
TPAFGATTTPAFGSTSTSLFGASSTPAFGSTAFGTSATGFGTSGTTAFGVNSTTQGFGSS
STSAFSFGSSPSFGQTTVSSGSTPFGATPSPFGAPAPAFGSQTAAPAFGQPQFANQAGGT
RIKPYAQTPDVDSATSGTQPAAKLDSISAMPEYKDKSHEELRWEDYQRGDKGGPNPSGTP
AAAPSFPSSQQNAFAPTSNPFNPPATNTFSTINPFAPKPAPTSTSPFNTSFNNASSSPFT
SSTSTTMFGQTGVSTFPASTSPSLFGNTNTASGTSSLFGTSMTNNPSPFGTGSSLANTQS
APLFSSSFAQPLSSTPAFSSGSLFGSTNPGNLFSSSGPSLFSTPTFQPSAAAQSSNMFSF
QPPIQPAVSTGGFPGFSSTTNQALIGQPTSQSSMVMQPAPISNPFGMLPAMPQMSIGNGG
SSPSVQYGISSLPVAEKPLQSRALSMAVPRHLSQRRIKLLPRKYNTISDGKVPFFADDEE
SPTPKADAFFIPRENPRNLVIRPIEQWPSRRETDRQSTLKNATDLNKYEGKSFDYSTGFH
INSPQQGHQRGKSAMSPSSRTPAVENDNQHEARAMAQHGNGNITSVERLLPKLPRADYFT
EPSIEELAAKERAEAGYCGSVRDFVVGRHGYGSIKFLGVTDVRCLDLESIVEFNNREVIV
YKDDSKKPPVGEGLNKAAEVTLLNIKCINKKTGEQYCEGARVERYREMLVKKAEEQGAEF
VSFDAAKGEWKFRVKHFSAYGLW
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctccaccaacccattcgggcagtcgtccaccaacgcatttggccagacctcg
tttggaactccgcagggattcggccagtcttccactgctgccaacaatccctttgcccca
aaaccgtttggcagcccgaccactacttttggggcacagactggaagctcactctttgca
actacatctaccggtgcctttggccagcagcaatccactcccgcatttggtacaacatcc
actggtgcctttggccagcagcaatccactcccacatttggcactccatcctcctctccg
ttcgggagctctacaccagccttcggtgcatcccccactcctgcctttggtgcgacatca
tctggatctttgtttggacagaagccaagttttgggggttttggatcatctcctagccag
ccaagtccttttggtagcacgttccagcaaacacaaccaacatttggcagcaccactttt
ggtgcatcaactacgccggcatttggtacgacgactacgccggcatttggcaccacaact
acaccggctttcggtgccacgactaccccagcatttggttcaacatcaacgtctttattt
ggtgcttctagcaccccagcatttggttctactgcctttggtacatctgctactggtttt
ggaacttcagggaccacagcatttggtgtgaatagtactactcagggttttggatcttca
agcacaagcgccttcagttttggctcttcaccatcttttggacaaacaacagtttcctct
ggtagcactccctttggagcaactccatcgccttttggtgcaccagctcctgcatttggc
tcacagacagcagcaccagcttttgggcaaccacaatttgctaatcaagctggaggaacc
agaataaaaccttatgctcaaacaccagatgttgacagtgctaccagtggtactcagcct
gctgcaaaacttgattccatctcagcgatgcctgaatacaaagacaagagtcacgaagaa
ttgaggtgggaagactatcagcgtggagacaagggtggaccaaacccttctggaactcca
gcagcggcacctagctttccatcatcgcaacagaatgcttttgctccaacaagcaatcca
tttaacccgcctgcgacaaacacattttcaacaatcaatccatttgctcctaagcctgct
ccaactagtacttcaccattcaacacctcatttaacaatgcatcttcgagcccattcaca
tcatccactagtaccacaatgtttgggcaaacaggtgtttctacatttccagcaagtact
tcgccatcattatttggaaataccaatactgcttctggtacatcgtccttatttggtaca
tcaatgacgaataatccaagtccattcggcactggctcatcattagctaacactcaatca
gccccactattttcctcatcatttgctcaaccactatcaagtacaccggctttctcctct
gggagcctattcggttcaactaatcctggcaatctgtttagcagcagcgggccttcactt
ttttcaacaccaacatttcagccatctgccgctgctcaatcttcaaacatgttctccttc
caacctccgattcaaccagcagtttctacaggtggattccctggtttttccagcactacg
aatcaggccttgattggacagccaactagccagtccagtatggtcatgcagcctgctcct
atttcaaatccatttgggatgcttccagcaatgcctcaaatgtctattggaaatggtgga
tcttcaccatcagttcaatatgggatatcaagtttgccggttgctgagaagcctcttcaa
agtagagcattgtccatggcggttcctaggcatttgtcacagagaaggataaaactgctg
ccgagaaaatataatacaatatctgatggcaaggttccattctttgctgatgatgaagaa
tctccaacaccgaaggcagatgcttttttcatccctagagagaacccaaggaatctggta
attcgtccaattgagcagtggccttcgcggagagaaactgatcggcagtcaactttgaag
aatgctactgatttgaataaatatgaaggtaaatcttttgattacagtactggatttcat
ataaatagtccccagcaagggcatcagcgtggtaagtctgctatgtcaccaagcagcagg
actcctgcagtggaaaatgacaatcagcatgaggccagggccatggctcagcatgggaat
ggcaatattacttcagttgagaggctgttgcctaaacttccacgtgcagattacttcaca
gagcctagtatagaggagcttgcagccaaagaacgtgcggaggcaggctactgcggttcg
gtgagggactttgttgtggggcgacatggctatggcagcatcaagtttctgggagtgacg
gacgtgaggtgcctggatctggagtcaatagtggagttcaacaaccgggaggtgattgtg
tacaaggacgacagcaagaagccccctgttggtgaggggctgaacaaggctgcggaggtg
actctactgaacatcaagtgcataaacaagaagactggggagcagtactgcgagggggca
agggtggagaggtacagggagatgctggtgaagaaggcggaggagcagggcgcggagttt
gtgtcctttgacgctgccaagggagagtggaagttcagggtgaagcacttcagcgcctat
gggctttggtga
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