Sorghum bicolor (sorghum): 110429832
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Entry
110429832 CDS
T01086
Name
(RefSeq) aladin
KO
K14320
aladin
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110429832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
110429832
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110429832
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC4_WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WD40
Beta-prop_IFT140_1st
Beta-prop_EML_2
WD40_Prp19
eIF2A
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
110429832
NCBI-ProteinID:
XP_021302172
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Position
8:1411558..1416310
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AA seq
444 aa
AA seq
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MPSFPPPGAVTICEINRDLVAADALSDARAKDAYGDVLGMVFAPIPFQPEALLPSREPAA
PAADQVEPAETAPAPGLAATISEFFRRMVFPPLDPNLLEEFDTQKVSWNPYKHCLAFVSG
KNQVTVQDFEDSDAKEPCILTSDHQTDVKAVEWRPNSGKMIAVACKGGICLWSASYPGNV
PFMKPGITSSSSSAFPRGSGGQWILVDVLRGSSAELISALCWKPDGRYLASASCNSPSFT
IWDVSQGLGTPIRRGLSNISLVRWSPSGDYLLAAKFDGTFHFWETNTWTSEPWSSSNGYV
SGANWDPEGRVALLSFSNSTTLGSIHFSSKPPSLDAHLLPVELPEIFSLIVSRGIEKLAW
DASGERLALSFKDGNEMYRGLIAVYDVRRSPLISLSLVGFIRGPGEGAKPLAFAFHSKFK
QGPLLSVCWSSGWCCTYPLILRSH
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcttccctccgccgggcgccgtcaccatctgcgagatcaaccgcgacctcgtt
gcggcggatgcgctctccgacgcccgcgccaaggacgcctacggggatgtgctcgggatg
gtcttcgcccctattccattccagccggaggctcttctccccagccgcgagcctgctgct
cctgccgcggaccaagtcgagcctgctgagactgcccccgcacctggtttggctgccacc
atatccgagttcttcaggcggatggtcttccctccactagatccaaatttgctagaagaa
tttgacacccagaaagtaagttggaatccatacaagcattgcttagcatttgtgtctggc
aagaaccaggttactgtccaagactttgaggattcagatgctaaagaaccatgcatttta
acaagtgaccatcaaacggatgttaaggctgttgagtggagaccaaatagcgggaagatg
attgcagttgcctgcaagggagggatatgcctctggtcggcatcatatcctggcaatgtt
ccgttcatgaaacctggcatcacctcatcttcctctagtgccttccctagaggttctggt
ggtcagtggatactggtggatgttcttcgtggctcttctgctgagctcattagtgcactt
tgttggaaacctgatgggagatacttggcatctgcctcatgtaatagtccatctttcaca
atttgggatgtgtctcaagggttgggaactcctatacggcgtggattaagcaatatatca
ttagtgcggtggtcacccagtggagattaccttctagctgctaaatttgatggtacattt
cacttctgggagacgaacacatggacttcagaaccctggtcttcgtctaatggatatgtg
tctggagcaaattgggatccagaaggtcgtgttgcattgttatccttttctaactcgacg
acacttggctcaattcacttctcatctaagccaccatccttagatgcccacctcctacca
gttgaacttccagaaattttctccctgattgttagccgaggcatagagaaattagcatgg
gatgcttcaggggaacgtctggcattgtcgttcaaagatggaaatgaaatgtaccgtggg
ctgattgctgtatatgatgtgcggagatctccacttatctcactatcactagttggattc
attcggggacctggagaaggagcaaagccactcgcttttgcttttcatagcaaatttaag
caagggccattgctttctgtgtgttggagtagtggttggtgttgtacatatccactgata
cttcgttctcattga
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