Sorghum bicolor (sorghum): 110429995
Help
Entry
110429995 CDS
T01086
Name
(RefSeq) long chain acyl-CoA synthetase 1-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00061
Fatty acid biosynthesis
sbi00071
Fatty acid degradation
sbi01100
Metabolic pathways
sbi01212
Fatty acid metabolism
sbi04146
Peroxisome
Module
sbi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
110429995
00071 Fatty acid degradation
110429995
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
110429995
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sbi01004
]
110429995
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbi04147
]
110429995
Enzymes [BR:
sbi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
110429995
Lipid biosynthesis proteins [BR:
sbi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
110429995
Exosome [BR:
sbi04147
]
Exosomal proteins
Exosomal proteins of breast milk
110429995
Exosomal proteins of breast cancer cells
110429995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
PDXDC1-like_cen2
Motif
Other DBs
NCBI-GeneID:
110429995
NCBI-ProteinID:
XP_021302452
LinkDB
All DBs
Position
9:complement(2775355..2780473)
Genome browser
AA seq
670 aa
AA seq
DB search
MEANPKNVFTIKVEDGKPGKDGQPAVGPVFRSVLAKDGFPVLEPDMQTSWDVFRVAVGKY
PNNRMLGWRPFKDGVPGPYLWKSYKEIYDEVLQAGSALQHLGVQPGSRVGIYGANCPQWI
VAMEACNANSLICVPLYDTLGAGAVDYIINHAEIDVVFIQDKKIKEILSPNCKSAKRLKA
LVAFTSATSEQIKEADNFGMKMYAWNDFLKVGKDNPHQPCPPQASDICTIMYTSGTSGQP
KGVMLTHESHAMYVKGVDLFMDQFDDKMTTDDVFLSFLPLAHILDRMIEEYFFHKGASIG
YYHGDLNALRDDIVELKPTLLVGVPRVYERIYEGILKAIAELRPLRRVIFNALYNRKLAS
MKAGYSHKTASPFADMLAFRKVKARLGGRLRLLISGGAPLSNEIEEFMRVTTCAYFIQGY
GLTETLGPSTVCYIDDMALVGSAGVPATYTEIRLEEVPEMGYDPLGVPSRGEICIHGKSL
FAGYYKSPELTNEAIVDGWFHTGDIGEMTPDGILKVIDRKKNIFKLSQGEYVAVEYLEKV
YGFPPLVEDIWVYGDSFRSSLVAVVNPHEENTMKWAHSNGYKGSFAEICKLEGLKEYILK
ELAAVAQKNKLRGFEYIKGIVLDPVPFDIERDLVTATMKKRRKNMQNYYQSEIDIVYKKL
EAQKNAAKSK
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaaatccgaagaacgtcttcacgattaaagtggaggacggtaagcctggaaaa
gacggccagccggcggtaggaccggtgttccggagcgtgctggccaaggatggattccca
gttcttgagcctgacatgcaaacatcatgggatgtgttcagggtagcagtaggcaagtat
cccaacaaccggatgcttggatggcgtccgtttaaagatggagtgccagggccctacttg
tggaaatcatacaaggagatctatgatgaggtgctgcaagctggctctgctttgcagcac
ctgggagtgcaaccaggttccagggtcggaatctacggcgcaaactgtcctcagtggata
gtggcaatggaggcttgcaatgccaatagtctgatctgtgtcccactatatgatacttta
ggtgcaggagctgttgactacatcattaatcacgctgagattgatgttgtcttcatacag
gacaagaaaataaaagagatactatcccctaattgcaagtctgctaagagactaaaagct
ttggtggcattcacttcggcaacaagtgaacaaatcaaagaagcagataattttgggatg
aaaatgtacgcgtggaatgatttcttaaaagtgggaaaagataatcctcatcaaccttgc
cctccacaagcaagtgatatatgcactatcatgtatacaagtggaacaagcggacagccc
aaaggtgtgatgctgacccatgaaagccatgccatgtatgtaaaaggggtggacctcttt
atggatcagtttgatgacaagatgacaacagatgatgtctttctatcctttctcccactt
gctcacatccttgaccgcatgattgaagagtatttctttcacaaaggggcctcaattggc
tattaccatggagatttgaatgccttgagggacgatatcgtggagctaaagccaacttta
ctggttggggtgccccgagtgtacgaaagaatttatgaaggtatcttaaaggccattgcg
gaactcagacctctaagaagggtaatttttaatgctttgtacaatcgcaaactggcaagc
atgaaagcaggctactcgcacaaaactgcttcaccttttgcggacatgctggcttttcgc
aaggtcaaggcaaggcttggaggtcgtcttcgcttattaatttcaggaggggctccgtta
agtaatgagattgaagagttcatgagagtgaccacctgtgcatactttatccaaggctat
ggtttaacagaaacactgggacctagtaccgtctgctacattgatgacatggccctggtt
ggaagtgctggtgtacctgccacctacactgaaatacgactggaagaagtacccgagatg
gggtatgatccacttggtgtcccttcacgtggtgaaatctgcattcacgggaaatctctc
ttcgctgggtactacaaaagtccagaactcacaaatgaagcaatagttgacggatggttt
catacaggtgacattggagagatgaccccagacggaatcctgaaggtgattgaccgaaaa
aagaacatatttaagttgtcacaaggggagtatgttgcagttgagtacctggagaaagtg
tatggcttccctccacttgttgaagatatctgggtatatggggacagtttcagatcaagt
ttagttgcagtagtcaatccacacgaagaaaacacaatgaagtgggcacactccaatggc
tataagggttcgtttgctgaaatctgcaaacttgaaggacttaaagagtacatcctgaaa
gagctggcagctgttgcacagaagaacaagctacgaggttttgagtacatcaaaggcata
gtgttggatcctgtaccttttgacattgaaagggatttggtgactgcaacaatgaagaag
agaagaaagaatatgcagaactattaccagtctgagattgacatagtatacaaaaagctg
gaggcacagaagaatgctgccaaatctaagtga
DBGET
integrated database retrieval system
