Sorghum bicolor (sorghum): 110430257
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Entry
110430257 CDS
T01086
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110430257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
110430257
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110430257
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
110430257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
110430257
NCBI-ProteinID:
XP_021303269
LinkDB
All DBs
Position
9:4504756..4505369
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AA seq
176 aa
AA seq
DB search
MVHDLTVVDEDVLNCGVCFLPLKPPIFQCAVGYALCSSCSDELKDARKCHLCGVAMPGGY
QRCHVLERVVDSIRSPCPHAAYGCDATPVYHAGEEHLRQCPHAPCHCPAGDGCSFVGSVT
TLVEHLTAAHSWPCTAEDRPGYTFDVNLRDGFNFLTARRPQQCKYCWQELITNTRV
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atggtccatgatctcacggtggtggacgaggacgtgctaaactgcggcgtctgctttctc
ccgctgaagccacccatcttccagtgcgccgtgggatatgcgttgtgctcgtcgtgctcc
gacgagctcaaggatgcccgaaagtgtcacctgtgtggtgtcgccatgcccggcggctac
caacggtgccacgtcttggagcgggtggtggactccatccgcagcccgtgtccgcatgcg
gcctacggctgcgatgcgacgcccgtgtatcacgccggcgaggagcacctccggcagtgc
ccgcatgcgccgtgccactgccccgccggcgacggctgtagcttcgtcggctctgtaacg
acgctcgtcgagcacctcacggcggcgcacagctggccgtgcactgccgaggaccgtccc
ggctataccttcgacgtcaacctccgtgatggcttcaacttcctcaccgcgcgccgtccg
cagcagtgcaagtactgttggcaagaattgatcacaaacacacgagtatga
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