Sorghum bicolor (sorghum): 110430546
Help
Entry
110430546 CDS
T01086
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110430546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbi03041
]
110430546
Spliceosome [BR:
sbi03041
]
Common components
Common spliceosomal components
SR proteins
110430546
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_YTH1
RRM_occluded
RRM_7
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
110430546
NCBI-ProteinID:
XP_021303985
LinkDB
All DBs
Position
9:45336915..45341250
Genome browser
AA seq
278 aa
AA seq
DB search
MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAED
AIYGRDGYNFDGHRLRVELAHGGRGPSSFDRSSSYSSAGQRGASKRSDYRVMVTGLPSSA
SWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIRKLDDSEFRNAFSRTYI
RVREYDARRSRSRSRGRSRSRSKSRSRSHSRSYSRSRSRSYSKSRSPRSRSASQSKSPVK
ARSPSRSPPVSPPRDKSISRSPARSKSLPRSCSPAKPE
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgacccggcggaacggctgtacgatctacgtgggcaatctccccggcgacatccgcgag
agggaagtagatgatctcttctacaagtatggacgtatcgtggaaattgacttgaagatt
ccaccaaggcctcctggttttgcttttgttgagtttgaggatccacatgatgctgaagat
gcaatatatggccgtgatggatacaactttgatggccataggttgcgggtggaattagct
catggtggacgaggcccatcttcttttgatcgatctagcagctatagcagtgctgggcaa
cgcggtgcctctaaacgttctgattaccgtgttatggttactggattaccttcttcagca
tcatggcaagatctcaaggatcatatgcggcgagctggtgatgtctgtttcactgatgtg
tatcgtgaggctggagcaactattggaatagctgattatactaactatgaagatatgaaa
catgcgataaggaagctagatgattctgagttccgtaatgctttttcaaggacatatatc
cgggtgagggagtatgatgctaggcgcagccgttctcgctccagaggcagaagccgtagc
cgctctaagtcaagaagcagaagtcatagccgctcatactcaagaagtagaagccgcagt
tatagcaagagtaggagcccaagatctagatctgcttctcagtcaaaatcacctgttaaa
gcaagatcaccatccagatcccctcctgtttctcccccacgtgacaagtctataagcagg
agtcctgccaggagcaaaagtctgccccgatcttgttctccggcaaaacctgaatga
DBGET
integrated database retrieval system
