Sorghum bicolor (sorghum): 110430805
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Entry
110430805 CDS
T01086
Name
(RefSeq) protein spotted leaf 11-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110430805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
110430805
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110430805
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
U-box type E3
110430805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
MLKL_N
Arm_2
Neurochondrin
KAP
zf-Nse
SARG
ATP-synt_B
ArlS_N
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
110430805
NCBI-ProteinID:
XP_021304475
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All DBs
Position
1:complement(70150735..70155908)
Genome browser
AA seq
749 aa
AA seq
DB search
MDDEAAKSVPTSDMNTDAAAEAEAAAAPLRPSSSEAAEREAKVEGADEEGQVVERLVELV
SEIATISDFRNSYRRQFCNLSRRIRLLVPMLEEAKEAPAPLPAASEAALRRLRDALHAAR
ELLRLGSSGSKIFLVLDREKIMKTFQDVTARLEQALAGISFDELDISDEVREQVELVHTQ
FKRAKERSDSSDDDLFNELMSLYNSSSSASVDPDILRRLSEKLQLVTIYDLNHESLTLHE
MARGGDPGAVVEKMSMLLKRIKDFVQTEDPEMGARASTANIFPKDNSARPVIPDDFRCPI
SLDLMSDPVIVATGQTYERGYIEMWLEAGHDTCPKTQQKLANKSLTPNYVLRSLITQWCE
ANGIEPPKRPAQLKDAPLPCSAAEHSNVLELLQKLSSQNLEDQRGAAGMLRQLAKRSAEN
RACIGDAGAIPILVSMLSTTDVSTQEHVVTALLNLSIYEENKARIISSGAVPGIVHVLKR
GSMEARENSAATLFSLSIVDENKVTIGCSGAIPALVQLLSDGSQRGKKDAATALFNLCIY
QGNKRKAVRAGLVPILLELLMESESGMVDEALAILAILSGHPEGKAAIGAASAIPVLVGV
IRTGSPRSKENAAAVMVHLCNGEGEQQQQHLAEAQEQGIVSLLEELAESGTDRGKRKAVH
LLERMNRFLKRQSQAQAEAEAMAQAHAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQ
PQILVQAEAHADMQAERSLLPTSPDISDR
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgaggcggccaagtctgttcctacatcagacatgaataccgacgctgccgcg
gaagccgaggcggccgccgctccgctgcggccctcgagctctgaagcggcggagagggag
gcaaaggttgagggcgcggatgaggagggccaggtggttgagcgattggtcgagctggtg
agcgagatcgcgaccatctcggacttcaggaactcgtacaggcggcagttctgcaacctg
tcccggcggatccggctcctcgtgcctatgctggaggaggccaaggaagcgcccgcgccg
cttccggcggcgtcggaggccgcgctacggcggctcagggacgcgctccacgccgccagg
gagctgctccggctcggcagcagcggcagcaagatcttcctggttcttgatagagagaaa
ataatgaagactttccaggatgttactgcaagacttgaacaagccttagctggtatttcg
tttgatgaacttgatatatctgatgaagtaagagagcaggttgaattggtgcatactcag
ttcaaaagagctaaggaacgatcagattcatctgatgatgatctttttaatgagctgatg
tctctctataattcaagcagcagtgctagtgttgacccagatattcttcgaaggttatct
gagaagttgcagcttgtcacaatatatgacctcaatcatgagtctctgaccttgcatgag
atggctagaggcggtgatcctggtgcagttgttgaaaagatgtcaatgctcctcaaaagg
attaaggattttgtgcagacagaagaccctgagatgggcgctcgagcaagtacagcaaac
attttcccaaaagacaactcagcacgtcctgttattcctgatgatttccgttgcccaata
tcactggatttaatgagcgacccagttattgttgccactgggcagacttatgagcggggg
tacatagagatgtggctggaggctggccatgatacctgtccgaagacacagcagaagctt
gctaataaatccctgactccaaattatgtcctacgtagcctcataactcaatggtgtgag
gcaaatggtattgaacctccaaaacgccctgctcaacttaaggatgcaccattgccatgt
agtgctgctgaacatagcaatgttcttgagcttcttcagaaactgtcatcccaaaacctt
gaagatcaacgtggcgctgctggtatgcttcgtcagcttgccaagcgcagtgctgaaaat
cgtgcttgtattggagatgctggtgctattcctattcttgttagtatgctatcaaccact
gatgttagcacccaggaacacgtggttactgctctcttgaatctttccatctatgaagag
aacaaggcaaggataatctcttctggagctgttcctggaattgtgcacgtattaaagagg
ggcagcatggaggctcgggagaattcagccgccacactgttcagcctatctattgtagat
gagaacaaggtgactattgggtgctcaggggcaattcctgcgcttgtgcagctattgagt
gacggaagccaacggggtaaaaaggatgcagcaacagcactatttaacttgtgtatttac
cagggcaacaagcggaaagctgttagagctggattggtacctatactactagaactactc
atggagtctgaaagtgggatggtagatgaggcccttgcaatattggcaatcctctcaggc
caccctgaggggaaagcagctattggtgctgcttctgcaatacctgtacttgttggagtt
atcagaactggatctccaaggagcaaggaaaatgctgctgctgttatggtgcatctatgc
aatggcgaaggagaacagcagcaacagcatcttgctgaagcacaagagcagggcatcgtg
tctttgctggaggaactagcagaaagtggcacggacagaggaaagaggaaagctgtgcat
ctgctcgaacgaatgaatcggttcctaaagcggcagagtcaagcccaagccgaagcagag
gccatggcacaggctcacgcgcaagcacaagcacaagcacaagcacaggcacaagcacag
gcacaggcacaggcacaggcacaggcacaggcacaggcacaggcacaggcacaggcacag
cctcagatcctggttcaagctgaagcacacgcagatatgcaagctgagcgatcactactt
cccacttcaccagatatttctgatagatga
DBGET
integrated database retrieval system
