Sorghum bicolor (sorghum): 110430917
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Entry
110430917 CDS
T01086
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110430917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
110430917
03016 Transfer RNA biogenesis [BR:
sbi03016
]
110430917
03012 Translation factors [BR:
sbi03012
]
110430917
04131 Membrane trafficking [BR:
sbi04131
]
110430917
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbi04147
]
110430917
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
110430917
Transfer RNA biogenesis [BR:
sbi03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
110430917
Translation factors [BR:
sbi03012
]
Eukaryotic type
Elongation factors
110430917
Membrane trafficking [BR:
sbi04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
110430917
Exosome [BR:
sbi04147
]
Exosomal proteins
Proteins found in most exosomes
110430917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FlpD
Semialdhyde_dhC
AAA_22
SRPRB
Motif
Other DBs
NCBI-GeneID:
110430917
NCBI-ProteinID:
XP_021304814
LinkDB
All DBs
Position
10:52136885..52140420
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIHFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGIIKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AELVTKIDRRSGKELEKEPKFLKNGDAGMVKMVPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPTGAKVTKAAAKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggagaagactcacataaacattgtggtcattggccatgtcgactctggcaag
tcgaccaccactggccacctgatctacaagcttggtggtattgacaagcgtgtgatcgag
aggttcgagaaagaggctgcggagatgaacaagaggtcgttcaagtatgcgtgggtgctt
gacaagctcaaggctgagcgtgagagaggtatcacaattgatattgccctgtggaagttc
gagaccaccaagtactactgcacggtcattgatgcccctggccaccgtgacttcatcaag
aatatgatcactggcacttctcaggctgactgtgctgttcttatcattgactccaccact
ggtggttttgaggctggtatctccaaggatggccagacccgtgagcatgctctccttgct
ttcacacttggagtgaagcagatgatttgctgctgcaataagatggatgccaccacaccc
aagtactcgaaggcccgttatgatgaaattgtgaaggaagtctcttcctacctgaagaag
gttggatacaacccagacaagatccactttgttcccatctctggttttgaaggtgacaac
atgattgagaggtccaccaaccttgactggtacaagggcccaaccctgcttgaggctctg
gacttaatcaatgagccaaagaggccttcagacaagcccctgcgtctcccccttcaggat
gtgtacaagattggtggtattggaactgttcctgtgggacgtgttgagactggtatcatc
aagccgggtatggttgtcaccttcggtcctagtggccttacaactgaggttaagtctgtt
gagatgcaccacgaggctctccaggaggcccttcctggtgacaatgttggcttcaacgtt
aagaatgttgctgtgaaggatctgaagcgtgggtatgtggcctccaactccaaggatgac
cctgccaaggaggctgctagcttcacctcacaggtcatcatcatgaaccaccctgggcag
attggcaatggctatgccccagtgctggactgccacacctcacacattgctgtcaagttt
gctgagcttgttaccaagattgataggcgatctggcaaggagcttgagaaggagcccaaa
ttcctcaagaacggtgatgctggtatggtgaagatggttcccactaagcccatggtggtg
gagaccttctctgagtatcctcctcttggtcgctttgctgtccgggacatgaggcaaacg
gtggctgttggagtcatcaagagcgtggagaagaaggacccaactggagccaaggtgacc
aaggctgccgccaagaagaaatga
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