Sorghum bicolor (sorghum): 110430978
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Entry
110430978 CDS
T01086
Name
(RefSeq) soluble starch synthase 1, chloroplastic/amyloplastic
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00500
Starch and sucrose metabolism
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
Module
sbi_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
110430978
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sbi01003
]
110430978
Enzymes [BR:
sbi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
110430978
Glycosyltransferases [BR:
sbi01003
]
Polysaccharide
Storage polysaccharide
110430978
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
Glycos_transf_1
Glyco_trans_1_4
GT4-conflict
Motif
Other DBs
NCBI-GeneID:
110430978
NCBI-ProteinID:
XP_021304989
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All DBs
Position
10:complement(3694402..3703046)
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AA seq
647 aa
AA seq
DB search
MATPSAVGAACLVLARAAAGLGLGPGRGGDRARPRRLQRVVRRRCVAELSREGPAPTPRP
LPPALLAPPLVPAFLAPPSEPEGEPASTPPPLPDAGLGDLGLQPEGIAEGSIDETVVVAS
EQDSEIVVGKEQARAKVTQSIVFVTGEASPYAKSGGLGDVCGSLPVALAARGHRVMVVMP
RYLNGTSDKNYANAFYTEKHIRIPCFGGEHEVTFFHEYRDSVDWVFVDHPSYHRPGNLYG
DKFGAFGDNQFRYTLLCYAACEAPLVLELGGYIYGQNCMFVVNDWHASLVPVLLAAKYRP
YGVYKDSRSILVIHNLAHQGVEPASTYPDLGLPPEWYGALEWVFPEWARRHALDKGEAVN
FLKGAVVTADRIVTVSKGYSWEVTTAEGGQGLNELLSSRKSVLNGIVNGIDINDWNPATD
KCIPCHYSVDDLSGKAKCKSALQKELGLPIRPEVPLIGFIGRLDYQKGIDLIQLIIPHLM
RDDVQFVMLGSGDPELEDWMRSTESDFKDKFRGWVGFSVPVSHRITAGCDILLMPSRFEP
CGLNQLYAMQYGTVPVVHATGGLRDTVENFNPFGENGEQGTGWAFAPLTTENMLWTLRTA
ISTYKEHKSSWEGLMKRGMSKDFTWDHAAEQYEQIFQWAFIDRPYVM
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccctcggccgtgggcgccgcgtgcctcgtcctagcgcgagccgccgccggg
cttgggcttgggcccgggcggggcggcgatcgggcgcgcccgcgccggctccagcgcgtg
gtgcgcaggcggtgcgtcgcggagctgagcagggagggtcccgcgccgacgccgcgcccg
ctgccacccgcgctgctggcgcccccgctcgtgcccgccttcctcgcgccgccgtccgag
cccgagggtgagccggcgtcgacaccgccgcccctgcccgacgccggtctcggcgacctc
ggtctccaacctgaagggattgctgagggttccatcgatgagacagtagttgtggcaagt
gagcaagattctgagatcgtggttggaaaggagcaagctcgagctaaagtaacacaaagc
attgtctttgtaactggcgaagcttctccttatgcaaagtctgggggtctaggagatgtt
tgtggttcattgccagttgctcttgctgctcgtggtcaccgtgtgatggttgtaatgccc
agatatttaaatggtacctctgataagaattacgcaaatgcattttacacagaaaagcac
attcggattccatgctttggcggtgaacatgaagttacctttttccatgagtacagagat
tcagttgactgggtgtttgttgatcatccctcatatcacagacctggaaatttatatgga
gataagtttggtgcttttggtgataatcagttcagatacacgctcctttgctatgctgca
tgtgaggctcctttggtccttgaattgggaggatatatttatggacagaattgcatgttt
gttgtgaatgattggcatgccagtctagtgccagtccttcttgctgcaaaatatagacca
tatggtgtttataaagactcccgcagcattcttgtaatacataatttagcacatcagggt
gtagagcctgcaagcacatatcctgaccttgggttgccacctgaatggtatggagctctg
gagtgggtattccctgaatgggcaaggaggcatgcccttgacaagggtgaggcagttaat
tttttgaaaggtgcagttgtgacagcagatcgaattgtgactgtcagtaagggttattca
tgggaggtcacaactgctgaaggtggacagggtctcaatgagctcttaagctcccgaaag
agtgtattaaacggaattgtaaatggaattgacattaatgattggaaccctgcgacggac
aaatgtatcccttgtcattattctgttgatgacctctctggaaaagccaaatgtaaaagt
gcattgcagaaggagctgggtttacctataaggcctgaagttcctctgattggttttatt
ggaagattggattatcagaaaggcattgatctcattcaacttatcataccacatctcatg
cgggacgacgttcaatttgtcatgcttggatctggtgacccagagctcgaagactggatg
agatctacagagtcggacttcaaggataaatttcgtggatgggttggatttagtgttcca
gtttcccaccgaataactgccggctgcgatatattgttaatgccatccagattcgaacct
tgtggtctcaatcagctatatgctatgcagtatggcacagttcctgttgtccatgcaact
gggggccttagagatactgtggagaacttcaaccctttcggtgagaatggagaacagggt
acagggtgggcattcgcacccctaaccacggaaaacatgttgtggacattgcgaactgca
atttcgacatacaaggagcacaaatcttcctgggaagggctcatgaagaggggcatgtca
aaagacttcacgtgggaccatgccgctgaacaatacgaacaaatcttccagtgggccttc
atcgatcgaccctatgtcatgtaa
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