Sorghum bicolor (sorghum): 110431022
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Entry
110431022 CDS
T01086
Name
(RefSeq) phytoene synthase, chloroplastic
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00906
Carotenoid biosynthesis
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
Module
sbi_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
110431022
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sbi01006
]
110431022
Enzymes [BR:
sbi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
110431022
Prenyltransferases [BR:
sbi01006
]
Terpene biosynthesis
Squalene/phytoene synthase
110431022
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
110431022
NCBI-ProteinID:
XP_021305193
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All DBs
Position
10:complement(60960083..60964021)
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AA seq
419 aa
AA seq
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MAIILVRAASPAGLSDAAGIISHHGSLQCSSLPLLNKRPAPARRWMLCSLRYGCLGLDPG
RPSPPAVYSSLAVNPAGEAVVSSEQKVYDVVLKQSALLKRQLRKPVLDVVRPQEDLAEMP
RNGLNQAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYIT
PTALDRWEKRLEDLFAGRPYDMLDAALSDTISRFPIDIQPFRDMIEGMRSDLRKTRYNNF
DELYMYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRDVGEDAT
RGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVTELSQASR
WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKGKKLLALPVAYGKSLLLPCSLRNTQT
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggccatcatactcgtacgagcagcgtcgccggcggggctctccgacgccgccggcatc
atcagccaccatgggagtctccagtgctcctctctgcctctgctcaacaagaggccggcc
ccggcccggcggtggatgctctgctcgctcaggtacgggtgccttggcctcgaccccggc
cgcccctccccgcccgccgtctactccagcctcgccgtcaacccggcgggagaggccgtc
gtctcgtccgagcagaaggtctacgacgtcgtgctcaagcagtcggcattgctcaaacgc
cagctgcgcaagccggtcctcgacgtcgtcaggccccaggaggacctggcggagatgcca
cgcaacggcctcaaccaagcctacgaccgctgcggcgagatctgtgaggagtatgccaag
acgttttacctcggaactatgttgatgacagaggagcggcgccgcgccatatgggccatc
tatgtgtggtgtaggaggacagatgagcttgtggatgggccaaacgccaactacattaca
ccaacagctttggaccggtgggagaagagacttgaggatctgttcgcgggacgtccttac
gatatgctcgatgctgctctctctgataccatctcaaggttccccatagacattcagcca
ttcagggacatgattgaagggatgaggagtgaccttaggaagacaaggtataacaacttt
gacgagctctacatgtactgctactatgttgctggaactgtcgggttaatgagcgtacct
gtgatgggcatcgcacccgagtctaaggcaacaactgaaagtgtgtatagtgctgccttg
gctctcggaattgctaaccaactcacgaacatactccgggatgttggagaggatgctaca
agagggaggatatatttaccacaagatgagctcgcacaggcagggctctctgatgaggac
atcttcaagggggtcgtcacaaaccgatggagaaacttcatgaagaggcagatcaagagg
gcgaggatgttttttgaggaggcagagagaggggtaactgagctctcacaggctagcaga
tggccagtatgggcttccctgttgctgtacaggcaaatcctggatgagattgaagcgaac
gactacaacaacttcacaaagagggcctatgttggtaaagggaaaaaattgctggcactt
cctgtggcatatgggaaatcgctactgctaccgtgttcattgagaaatacccaaacctag
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