Sorghum bicolor (sorghum): 110431226
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Entry
110431226 CDS
T01086
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110431226
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sbi01009
]
110431226
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
110431226
03036 Chromosome and associated proteins [BR:
sbi03036
]
110431226
Protein phosphatases and associated proteins [BR:
sbi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
110431226
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
110431226
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
110431226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPP2R1A-like_HEAT
HEAT
HEAT_2
HEAT_EF3_N
HEAT_EZ
Vac14_Fab1_bd
Htt_N-HEAT_1
PDS5
TOR1L1_N
CLASP_N
Adaptin_N
CEP104-like_TOG
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
110431226
NCBI-ProteinID:
XP_021305685
LinkDB
All DBs
Position
10:52549356..52557995
Genome browser
AA seq
587 aa
AA seq
DB search
MAMIDEPLYPIAVLIDELKNEDIQLRLNSIRKLSTIARALGEERTRKELIPFLSENNDDE
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGAQMKEN
DIVDWFAPVVKRLAAGEWFTARVSSCGLFHIAYPSASEQLKAELRTIYGQLCQDDMPMVR
RAAASNLGKFAATVEQSHLKTEIMSIFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCAA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGTEPTRGDLVSAYVRLLCDNEAEVRIAA
AGKVTKFCKILNPQIAIEHILPCVKELSTDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLALLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLEDKVFSIRDAAANNLKRLAEEFGPEWAMQHIIPQV
LEKINNPHYLYRMTTLQAISLLAPVMGPDITCQQLLPVVIASSKDRVPNMKFNVAKVLQS
LVPILDQSVVEKAVKPCLVELSEDPDVDVRYYAHQALRACDQMVISS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctatgattgacgaacctctgtacccgattgctgtgctgattgatgaactgaaaaat
gaagatattcagttgcgccttaactccatcagaaagctttctacaattgcccgggcattg
ggtgaagaaagaacaaggaaagagctgattccgttccttagtgaaaacaacgacgatgaa
gatgaggtgcttcttgcaatggcggaagagttgggcgtttttattccttatgttggaggt
gtagagcatgcacacgttttgcttccaccactggaaacattgtgtactgtggaggaaacc
tgcgtcagagacaaggctgtggaatcgctttgtcggataggagcacagatgaaggaaaat
gatattgtggactggtttgcccctgtcgtaaagaggttggcggcaggcgagtggttcaca
gctcgagtttcgtcatgtggcctttttcatatcgcctatcctagtgcatctgaacaactg
aaggcagaactgaggacaatttatggccagttatgccaagacgacatgcctatggtacga
agagctgctgcatccaatcttggaaagtttgctgcaacagttgaacaaagtcatttgaag
acagaaatcatgtcaatatttgatgatctaactcaagatgatcaagattcagtgcgacta
ttggcagttgagggttgtgctgctcttgggaagttgttggagccccaagattgtgcagca
catattctcccagttattgtaaatttctctcaggataaatcttggcgtgtgcgttatatg
gtggcaaatcaactgtatgagctatgtgaagctgttggtactgagcccacaaggggtgat
ctggtgtcagcatatgttcgcctcctctgtgacaatgaggctgaagtgcggattgcagct
gctggaaaagttacaaaattctgcaaaatattaaacccacaaattgcaattgaacatatt
cttccgtgtgtcaaggaattatcaacagattcatctcaacatgttcgttcagctttggca
tcagttattatgggaatggctcctgtattgggaaaggatgccactattgaacaacttctt
cccatttttcttgctttgctgaaggatgagttccctgatgttcgactcaacattataagc
aaacttgatcaagttaaccaggttattggaattgacttgctgtcgcaatcacttctacca
gccattgtagagctcgctgaagataggcactggagagttcggcttgccataattgagtac
atacctttgttggccagccagttaggtgttggtttttttgatgacaaattgggggcactt
tgcatgcagtggttggaagataaggttttctcaatccgagatgctgctgccaacaattta
aagcgtttggcagaggaatttggccctgagtgggcgatgcaacatataattcctcaggtt
ttggagaagataaacaacccacattatctgtataggatgaccactttgcaagctatttct
ttgctagctcctgtcatgggtcctgatatcacatgccaacagttgctccctgttgtcatt
gcttcttcaaaggacagggttccgaacatgaaattcaatgttgctaaagtcctgcaatca
cttgtaccaatccttgatcaatctgttgtggagaaggcggtgaaaccatgcctagttgag
ctcagtgaggacccagatgtagatgtaagatactatgcacaccaggcccttcgggcgtgt
gaccaaatggtgatatctagctga
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