Sorghum bicolor (sorghum): 110432886
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Entry
110432886 CDS
T01086
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110432886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbi03041
]
110432886
Spliceosome [BR:
sbi03041
]
Common components
Common spliceosomal components
SR proteins
110432886
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
110432886
NCBI-ProteinID:
XP_021309672
LinkDB
All DBs
Position
2:73651299..73655736
Genome browser
AA seq
311 aa
AA seq
DB search
MGPLVVSPCRVRASLEESAALVAAPFPFPPHPLLSLSPSHPSSTRRSSSPPSRAASGSGE
MSRFGRSGPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFA
FVRYKYEDEAQKAVDRLDGRLVDGREIMVQFAKYGPNAERINKGRIVEPVPRPRGRSRSR
SPRRRYRDDYRDDYQDRDYRRRSRSRSRDRYARDRYRDRDYRRRSPSRSYSPEDYKKRGR
DSLSPARRSPSRSRSRSYSPDDYKRRGRDSSASPASRSPSRSPPRKMSPSPERSPAKHND
DRSPRSRSPST
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgggcccacttgtcgtctcaccgtgccgcgtgcgtgcaagcctagaagaatcggcagct
ttggtggccgcccccttccctttccctccccatcccctcctatccctctcgccttcccac
ccttcatccacccgccgctcctcgagcccaccgtcccgcgccgcctccggctccggcgag
atgtctcgcttcggtcgatccggtccgccgccgatccgcgacacgtactcactcctcgtc
ctcaacatcaccttccgcacgactgctgatgacctcttcccactcttcgacaagtacggc
gagattgtcgacatctacatcccaagggaccgcagaactggtgactcgcgcggattcgcg
ttcgtgaggtacaagtacgaggacgaggcacagaaggcagttgataggctcgatgggaga
ttggtagatgggagggagatcatggtgcagtttgccaagtacggcccaaatgctgagcgg
attaataaagggagaatagtggagccagttccaaggccaaggggccgttctagaagccgc
agtccaagacggaggtaccgtgatgattatcgagatgactaccaggatagagattataga
aggcgaagccgtagccggagtagagatagatatgcccgtgacaggtacagagatagggat
taccgccgtcgtagcccgagtcgcagctacagtcctgaagattacaagaagcgtgggaga
gacagtttgtctcctgcacgaagaagccctagtcgtagccgcagtcgcagctacagtcct
gatgattacaagaggcgtggcagagacagcagcgcatcacctgcaagtaggagccctagt
cgctcccctcctcgcaagatgtcaccttctcctgagagatctcctgccaagcacaatgat
gaccggtctccacgttctcggagcccttcgacataa
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